Gene detail

Detail information of GWHGAAZE009362

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDO66955.1	1.5772E-144	hypothetical protein CISIN_1g004453mg [Citrus sinensis]
Swissprot	tr\|Q9MB58\|F26_ARATH	4E-140	Fructose-2,6-bisphosphatase
trEMBL	tr\|A0A067FLD2\|A0A067FLD2_CITSI	6E-145	Uncharacterized protein {ECO:0000313\|EMBL:KDO66955.1}
TAIR10	AT1G07110.1	3E-116	fructose-2,6-bisphosphatase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	108675814	108678604	+
GWHAAZE00000002	mRNA	108675814	108678604	+
GWHAAZE00000002	exon	108675814	108675882	+
GWHAAZE00000002	exon	108676451	108676548	+
GWHAAZE00000002	exon	108676672	108676747	+
GWHAAZE00000002	exon	108677020	108677082	+
GWHAAZE00000002	exon	108677216	108677307	+
GWHAAZE00000002	exon	108677573	108677641	+
GWHAAZE00000002	exon	108677738	108677801	+
GWHAAZE00000002	exon	108677945	108678010	+
GWHAAZE00000002	exon	108678509	108678604	+
GWHAAZE00000002	CDS	108675814	108675882	+
GWHAAZE00000002	CDS	108676451	108676548	+
GWHAAZE00000002	CDS	108676672	108676747	+
GWHAAZE00000002	CDS	108677020	108677082	+
GWHAAZE00000002	CDS	108677216	108677307	+
GWHAAZE00000002	CDS	108677573	108677641	+
GWHAAZE00000002	CDS	108677738	108677801	+
GWHAAZE00000002	CDS	108677945	108678010	+
GWHAAZE00000002	CDS	108678509	108678604	+

Transcript Sequence
>GWHTAAZE009372 ATGTTCCATCTCTGTGTTCAGGTGAACAATATCAGCGGCTATCTTCCAGGGCGGATTGTATTTTTCTTGGTGAATATGCATCTGACACCACGTCCAATATTGCTTACCAGGCATGGAGAGAGTCGAGATAATGTTAGAGGCAGAATAGGGGGTGACACTGTTTTGAGTGATGCTGGGGAGCTTTACGCAAAGAAACTTGCTAACTTCGTGGAGAAGCGGCTGAAAAATGAAAGGGCTGCTTCTATATGGACTAGCACATTGCAGAAAACAATTTTGTCTGCAAATCAAATCAGTGGGTTCCCCAAGATACAATGGCGTGCACTTGATGAGATAAATGCTGGTGTATGTGATGGAATGACATATGAAGAAATAAAGAAGAACATGCCCGAGGAATATGAGTCACGCAAGAAGGACAAATTAAGGTATCGATATCCTCGTGGGGAGTCTTATCTTGATGTTATACAAAGATTAGAGCCTGTAATTATCGAACTTGAACGACAACGAGCACCTGTTGTAGTGATTTCCCATCAGGCGGTATTGAGAGCATTATATGCGTATTTTGCTGATAAGCCTCTGAAAGAAATTCCGTACATAGAGGTATTTGCCCTTTTTCAGATGCCACTTCATACAATAATAGAGATACAAATGGGAGTTACTGGCGTCCAAGAGAAAAGATATAAGCTCATGGATTGA

Network for GWHGAAZE009362

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00300.23	His_Phos_1	33	200	5.10E-34

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01103	PFKFB3	Metabolic pathways	map01100
		Fructose and mannose metabolism	map00051
		HIF-1 signaling pathway	map04066
		AMPK signaling pathway	map04152

Gene Ontology

GO term	Ontology	Name
GO:0006003	biological_process	fructose 2,6-bisphosphate metabolic process
GO:0003824	molecular_function	catalytic activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	30.821
	SRR3591706	second leaf	23.037
	SRR3591707	mature leaf	35.038
	SRR3591708	Shoot apex	25.794
	SRR3591709	Stem	34.312
	SRR3591710	White floral bud	22.243
	SRR3591711	White flower	34.673
	SRR3591712	Green floral bud	19.577
	SRR3591713	Yellow flower	43.102
SRP173429	SRR8316895	Juvenile bud stage	19.336
	SRR8316896	Juvenile bud stage	29.055
	SRR8316897	Juvenile bud stage	12.736
	SRR8316894	Third green stage	14.330
	SRR8316900	Third green stage	27.325
	SRR8316901	Third green stage	30.265
	SRR8316898	Complete white stage	18.333
	SRR8316899	Complete white stage	48.363
	SRR8316903	Complete white stage	25.965
	SRR8316902	Silver flowering stage	25.057
	SRR8316904	Silver flowering stage	27.418
	SRR8316905	Silver flowering stage	13.228
	SRR8316906	Gold flowering stage	42.610
	SRR8316907	Gold flowering stage	40.426
	SRR8316908	Gold flowering stage	40.967
SRP132670	SRR6706286	Control	15.363
	SRR6706287	Light intensity 50%	17.409
	SRR6706288	Light intensity 20%	15.590
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	27.914
	CNS0095593	Slightly white alabastrum(diploid) 2	28.802
	CNS0095594	Slightly white alabastrum(diploid) 3	27.289
	CNS0095595	Whole white alabastrum(diploid) 2	18.069
	CNS0095596	Whole white alabastrum(diploid) 3	21.994
	CNS0095597	Whole white alabastrum(diploid) 4	22.305
	CNS0095598	Silvery flower (diploied) 1	42.030
	CNS0095599	Silvery flower (diploied) 2	31.580
	CNS0095600	Silvery flower (diploied) 3	30.674
	CNS0095601	Golden flower (diploid) 1	28.668
	CNS0095602	Golden flower (diploid) 2	26.343
	CNS0095603	Golden flower (diploid) 3	24.518
	CNS0095604	Slightly white alabastrum(tetraploid) 1	23.317
	CNS0095605	Slightly white alabastrum(tetraploid) 2	18.689
	CNS0095606	Slightly white alabastrum(tetraploid) 3	25.183
	CNS0095607	Whole white alabastrum(tetraploid) 1	19.202
	CNS0095608	Whole white alabastrum(tetraploid) 2	16.835
	CNS0095609	Whole white alabastrum(tetraploid) 3	19.020
	CNS0095610	Silvery flower (tetraploid) 1	46.512
	CNS0095611	Silvery flower (tetraploid) 2	36.014
	CNS0095612	Silvery flower (tetraploid) 3	25.167
	CNS0095613	Golden flower (tetraploid) 1	34.532
	CNS0095614	Golden flower (tetraploid) 2	40.740
	CNS0095615	Golden flower (tetraploid) 3	38.222
CRA001975	CRR073297	Stem 1	16.479
	CRR073298	Stem 2	12.591
	CRR073299	Stem 3	4.126
	CRR073300	Leaf 1	11.439
	CRR073301	Leaf 2	15.841
	CRR073302	Leaf 3	5.588
	CRR073303	Juvenile bud 1	7.080
	CRR073304	Juvenile bud 2	3.291
	CRR073305	Juvenile bud 3	6.625
	CRR073306	Third green 1	1.297
	CRR073307	Third green 2	1.966
	CRR073308	Third green 3	1.570
	CRR073309	Second white 1	1.721
	CRR073310	Second white 2	3.835
	CRR073311	Second white 3	4.066
	CRR073312	Silver flowering 1	1.346
	CRR073313	Silver flowering 2	2.577
	CRR073314	Silver flowering 3	1.010
	CRR073315	Gold flowering 1	6.802
	CRR073316	Gold flowering 2	15.939
	CRR073317	Gold flowering 3	2.621
	CRR073318	Tawny withering 1	10.756
	CRR073319	Tawny withering 2	12.894
	CRR073320	Tawny withering 3	10.638