Gene detail

Detail information of GWHGAAZE009365

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010257097.1	3.8624E-152	PREDICTED: probable N-acetyltransferase HLS1-like isoform X2 [Nelumbo nucifera]
Swissprot	tr\|O64815\|HLS1L_ARATH	9E-94	Probable N-acetyltransferase HLS1-like
trEMBL	tr\|V7BP10\|V7BP10_PHAVU	2E-149	Uncharacterized protein {ECO:0000313\|EMBL:ESW18790.1}
TAIR10	AT2G30090.1	2E-82	Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	108762082	108763228	-
GWHAAZE00000002	mRNA	108762082	108763228	-
GWHAAZE00000002	exon	108762082	108762912	-
GWHAAZE00000002	exon	108763058	108763228	-
GWHAAZE00000002	CDS	108763058	108763228	-
GWHAAZE00000002	CDS	108762082	108762912	-

Transcript Sequence
>GWHTAAZE009375 ATGTCAAAAAAAGAGCTAATACGGAGCTATGACGAACAAATCGACAGGGTTAAAGTGGAAGACCTCGAAAGAAAATGCTCGGTAGGACCGGCCGGACATGTGTTCCTCTACACAGACACTATGGGCGACCCCATTTGTAGAATCCGCAACAGTCCCTTATATACAATGCTTGTGGCCGAGTTGAACAATGAGATAATTGGCGTAATTCAAGGCTCTATAAAACTAGTCACACTCCACAAACCCCCCAAAGATCTCGCCAAAGTGGGATATATACTAGGCCTAAGGGTCTCACCCCACCACCGCCGCAAAGGGATTGCATACCATCTAGTGCGCCACTTAGAAGATTGGTTCATTGCCAATCAAGCCGATTACGCTTACATGGCAACTGAAAAGGCTAACTATGTCTCTGTCAACCTATTCATTAACAAACTCGGCTATGCCAAGTTTAGAACACCCACGATATTAGTAAACCCCGTGACCAGCCGTCACTTATGCATTTCGAAGAACACTGTGGTTGCAAAGCTAAAAGTGGAACAAGCAGAGCTTCTTTACCGAAAATTCATGGGCTCAGCTGAATTCTTTCCTAAAGACATCGACAAAGTGTTGAAGAACAAGCTTAGTTTGGGAACATGGGTAGCTTATCCTCGAGGAGGAGGGGAGTTTGGGGAATTTGGAAGAGTGCCAGAGAGTTGGGCAATGGTTAGTGTTTGGAACAGTGGTGGGCTATTCAAGATGCGAATAGGGAGAGCAAAATTATCATGTTGGTTATATAAGAAGGGTTTGAAATTTTTGGAGTGGGGTTTTCCGTGTCTTAGTGGGGCTGAATTGCCGGAGTTTTGTAGGCCATTTGGGTTTTATTTTGTGTATGGGGTGCATGGAGAAGGGGCAATGAAGGGGAAATTGTTGAGGATTTTGTACAAGTTTGTGCATAATATGGCGGCGAAGGAGATTGAGGAGTGTAAGTTTGTGGTGACAGAGATTGGGGTTGTAGTGATGGTGTGA

Network for GWHGAAZE009365

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00583.26	Acetyltransf_1	48	146	1.70E-14

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	molecular_function	N-acetyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.446
	SRR3591706	second leaf	0.291
	SRR3591707	mature leaf	0.328
	SRR3591708	Shoot apex	0.856
	SRR3591709	Stem	0.486
	SRR3591710	White floral bud	0.455
	SRR3591711	White flower	0.106
	SRR3591712	Green floral bud	0.227
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.034
	SRR8316897	Juvenile bud stage	0.106
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.159
	SRR8316898	Complete white stage	0.055
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.110
	SRR8316904	Silver flowering stage	0.069
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.301
	SRR8316907	Gold flowering stage	0.248
	SRR8316908	Gold flowering stage	0.127
SRP132670	SRR6706286	Control	0.045
	SRR6706287	Light intensity 50%	0.020
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.090
	CNS0095598	Silvery flower (diploied) 1	0.039
	CNS0095599	Silvery flower (diploied) 2	0.095
	CNS0095600	Silvery flower (diploied) 3	0.634
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.031
	CNS0095603	Golden flower (diploid) 3	0.059
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.156
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.096
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.170
	CNS0095610	Silvery flower (tetraploid) 1	0.136
	CNS0095611	Silvery flower (tetraploid) 2	0.059
	CNS0095612	Silvery flower (tetraploid) 3	0.205
	CNS0095613	Golden flower (tetraploid) 1	0.036
	CNS0095614	Golden flower (tetraploid) 2	0.370
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.117
	CRR073299	Stem 3	0.154
	CRR073300	Leaf 1	0.205
	CRR073301	Leaf 2	0.104
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.089
	CRR073304	Juvenile bud 2	0.053
	CRR073305	Juvenile bud 3	0.048
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.041
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.179
	CRR073317	Gold flowering 3	0.029
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000