Detail information of GWHGAAZE009369


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008354886.10PREDICTED: probable inactive receptor-like protein kinase At3g56050 [Malus domestica]
Swissprottr|C0LGQ4|MRH1_ARATH9E-168Probable LRR receptor-like serine/threonine-protein kinase MRH1 (Precursor)
trEMBLtr|A0A061H0C9|A0A061H0C9_THECC0Leucine-rich repeat protein kinase family protein, putative isoform 1 {ECO:0000313|EMBL:EOY34564.1}
TAIR10AT2G40270.21E-112Protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene108853006108860528-
GWHAAZE00000002mRNA108853006108860528-
GWHAAZE00000002exon108860454108860528-
GWHAAZE00000002exon108858016108858145-
GWHAAZE00000002exon108857584108857722-
GWHAAZE00000002exon108856931108857002-
GWHAAZE00000002exon108856684108856827-
GWHAAZE00000002exon108856451108856591-
GWHAAZE00000002exon108855104108855684-
GWHAAZE00000002exon108854830108855020-
GWHAAZE00000002exon108854604108854736-
GWHAAZE00000002exon108853006108853613-
GWHAAZE00000002five_prime_UTR108860454108860528-
GWHAAZE00000002five_prime_UTR108858125108858145-
GWHAAZE00000002CDS108858016108858124-
GWHAAZE00000002CDS108857584108857722-
GWHAAZE00000002CDS108856931108857002-
GWHAAZE00000002CDS108856684108856827-
GWHAAZE00000002CDS108856451108856591-
GWHAAZE00000002CDS108855104108855684-
GWHAAZE00000002CDS108854830108855020-
GWHAAZE00000002CDS108854604108854736-
GWHAAZE00000002CDS108853006108853613-
Transcript Sequence

Network for GWHGAAZE009369

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08263.13LRRNT_234761.20E-09
PF07714.18PK_Tyr_Ser-Thr4166714.30E-28
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-VI-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.605
SRR3591706second leaf2.525
SRR3591707mature leaf0.544
SRR3591708Shoot apex6.697
SRR3591709Stem47.120
SRR3591710White floral bud2.841
SRR3591711White flower2.402
SRR3591712Green floral bud6.468
SRR3591713Yellow flower0.901
SRP173429 SRR8316895Juvenile bud stage 5.663
SRR8316896Juvenile bud stage 7.312
SRR8316897Juvenile bud stage 4.108
SRR8316894Third green stage 3.584
SRR8316900Third green stage 6.520
SRR8316901Third green stage 7.684
SRR8316898Complete white stage 0.744
SRR8316899Complete white stage 9.098
SRR8316903Complete white stage 1.603
SRR8316902Silver flowering stage0.691
SRR8316904Silver flowering stage1.229
SRR8316905Silver flowering stage0.436
SRR8316906Gold flowering stage 0.603
SRR8316907Gold flowering stage 0.579
SRR8316908Gold flowering stage 0.441
SRP132670SRR6706286Control7.304
SRR6706287Light intensity 50%7.007
SRR6706288Light intensity 20%7.159
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.765
CNS0095593Slightly white alabastrum(diploid) 27.432
CNS0095594Slightly white alabastrum(diploid) 35.941
CNS0095595Whole white alabastrum(diploid) 24.291
CNS0095596Whole white alabastrum(diploid) 33.297
CNS0095597Whole white alabastrum(diploid) 43.737
CNS0095598Silvery flower (diploied) 13.944
CNS0095599Silvery flower (diploied) 22.649
CNS0095600Silvery flower (diploied) 32.148
CNS0095601Golden flower (diploid) 12.127
CNS0095602Golden flower (diploid) 22.573
CNS0095603Golden flower (diploid) 32.127
CNS0095604Slightly white alabastrum(tetraploid) 10.816
CNS0095605Slightly white alabastrum(tetraploid) 20.688
CNS0095606Slightly white alabastrum(tetraploid) 32.163
CNS0095607Whole white alabastrum(tetraploid) 10.375
CNS0095608Whole white alabastrum(tetraploid) 20.337
CNS0095609Whole white alabastrum(tetraploid) 30.342
CNS0095610Silvery flower (tetraploid) 10.128
CNS0095611Silvery flower (tetraploid) 20.054
CNS0095612Silvery flower (tetraploid) 30.287
CNS0095613Golden flower (tetraploid) 10.024
CNS0095614Golden flower (tetraploid) 20.006
CNS0095615Golden flower (tetraploid) 30.153
CRA001975CRR073297Stem 18.700
CRR073298Stem 28.052
CRR073299Stem 35.950
CRR073300Leaf 19.809
CRR073301Leaf 29.784
CRR073302Leaf 35.303
CRR073303Juvenile bud 16.515
CRR073304Juvenile bud 23.676
CRR073305Juvenile bud 38.402
CRR073306Third green 10.376
CRR073307Third green 20.456
CRR073308Third green 30.922
CRR073309Second white 10.125
CRR073310Second white 20.205
CRR073311Second white 30.278
CRR073312Silver flowering 10.194
CRR073313Silver flowering 20.145
CRR073314Silver flowering 30.272
CRR073315Gold flowering 12.796
CRR073316Gold flowering 23.358
CRR073317Gold flowering 33.086
CRR073318Tawny withering 114.826
CRR073319Tawny withering 213.022
CRR073320Tawny withering 319.194