Detail information of GWHGAAZE009404


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002275955.22.40523E-65PREDICTED: B3 domain-containing protein At2g36080-like [Vitis vinifera]
Swissprottr|Q53QI0|Y1160_ORYSJ1E-51B3 domain-containing protein Os11g0156000
trEMBLtr|F6HKN6|F6HKN6_VITVI2E-65Putative uncharacterized protein {ECO:0000313|EMBL:CCB55458.1}
TAIR10AT5G06250.26E-37AP2/B3-like transcriptional factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene109535820109536482+
GWHAAZE00000002mRNA109535820109536482+
GWHAAZE00000002exon109535820109536482+
GWHAAZE00000002CDS109535820109536482+
Transcript Sequence

Network for GWHGAAZE009404

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.22B3531531.20E-30
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.672
SRR3591706second leaf0.732
SRR3591707mature leaf0.627
SRR3591708Shoot apex1.436
SRR3591709Stem0.585
SRR3591710White floral bud10.181
SRR3591711White flower4.697
SRR3591712Green floral bud9.231
SRR3591713Yellow flower4.786
SRP173429 SRR8316895Juvenile bud stage 4.904
SRR8316896Juvenile bud stage 7.910
SRR8316897Juvenile bud stage 3.788
SRR8316894Third green stage 4.780
SRR8316900Third green stage 18.868
SRR8316901Third green stage 17.724
SRR8316898Complete white stage 7.372
SRR8316899Complete white stage 19.939
SRR8316903Complete white stage 12.130
SRR8316902Silver flowering stage12.438
SRR8316904Silver flowering stage16.771
SRR8316905Silver flowering stage16.368
SRR8316906Gold flowering stage 25.120
SRR8316907Gold flowering stage 27.726
SRR8316908Gold flowering stage 24.669
SRP132670SRR6706286Control25.269
SRR6706287Light intensity 50%31.852
SRR6706288Light intensity 20%38.106
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.009
CNS0095593Slightly white alabastrum(diploid) 210.028
CNS0095594Slightly white alabastrum(diploid) 36.003
CNS0095595Whole white alabastrum(diploid) 214.186
CNS0095596Whole white alabastrum(diploid) 325.244
CNS0095597Whole white alabastrum(diploid) 423.782
CNS0095598Silvery flower (diploied) 15.200
CNS0095599Silvery flower (diploied) 25.203
CNS0095600Silvery flower (diploied) 315.534
CNS0095601Golden flower (diploid) 16.953
CNS0095602Golden flower (diploid) 29.099
CNS0095603Golden flower (diploid) 310.198
CNS0095604Slightly white alabastrum(tetraploid) 114.752
CNS0095605Slightly white alabastrum(tetraploid) 212.648
CNS0095606Slightly white alabastrum(tetraploid) 319.943
CNS0095607Whole white alabastrum(tetraploid) 15.065
CNS0095608Whole white alabastrum(tetraploid) 212.006
CNS0095609Whole white alabastrum(tetraploid) 325.186
CNS0095610Silvery flower (tetraploid) 119.839
CNS0095611Silvery flower (tetraploid) 226.581
CNS0095612Silvery flower (tetraploid) 327.410
CNS0095613Golden flower (tetraploid) 121.111
CNS0095614Golden flower (tetraploid) 219.378
CNS0095615Golden flower (tetraploid) 345.645
CRA001975CRR073297Stem 115.638
CRR073298Stem 215.121
CRR073299Stem 322.702
CRR073300Leaf 136.570
CRR073301Leaf 223.261
CRR073302Leaf 321.285
CRR073303Juvenile bud 151.250
CRR073304Juvenile bud 239.852
CRR073305Juvenile bud 339.659
CRR073306Third green 124.214
CRR073307Third green 216.723
CRR073308Third green 322.016
CRR073309Second white 117.618
CRR073310Second white 219.859
CRR073311Second white 313.421
CRR073312Silver flowering 19.097
CRR073313Silver flowering 25.569
CRR073314Silver flowering 35.430
CRR073315Gold flowering 10.119
CRR073316Gold flowering 20.507
CRR073317Gold flowering 30.119
CRR073318Tawny withering 10.205
CRR073319Tawny withering 20.312
CRR073320Tawny withering 30.324