Gene detail

Detail information of GWHGAAZE009422

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006468162.1	1.0637E-172	PREDICTED: peroxidase 4-like [Citrus sinensis]
Swissprot	tr\|A7NY33\|PER4_VITVI	4E-173	Peroxidase 4 {ECO:0000250\|UniProtKB:Q42578} (Precursor)
trEMBL	tr\|A0A067DSE4\|A0A067DSE4_CITSI	4E-173	Uncharacterized protein {ECO:0000313\|EMBL:KDO41521.1}
TAIR10	AT5G05340.1	8E-125	Peroxidase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	109910591	109913103	-
GWHAAZE00000002	mRNA	109910591	109913103	-
GWHAAZE00000002	exon	109910591	109910982	-
GWHAAZE00000002	exon	109912036	109912204	-
GWHAAZE00000002	exon	109912380	109912571	-
GWHAAZE00000002	exon	109912876	109913103	-
GWHAAZE00000002	CDS	109912876	109913103	-
GWHAAZE00000002	CDS	109912380	109912571	-
GWHAAZE00000002	CDS	109912036	109912204	-
GWHAAZE00000002	CDS	109910591	109910982	-

Transcript Sequence
>GWHTAAZE009432 ATGGTTTCTTTGACTTCTTCTTCTTCTTTTTCAAAGGCCATTATGTCCATAGTTGTGATTGTGCTCTTAATGGGTAGTTCTTGTGCAAAACTCTCGACTAATTTTTACTCTAAAACATGTCCAAAGTTACTGAGTACCATAAAACCCATAGTTCAATGTGCAGTGTCTAATGAAAAGCGCATGGGTGCTTCTCTCCTTCGTCTCCATTTTCATGATTGCTTCGTCAATGGTTGTGATGGATCAATACTTCTTGATGACACATCTTCCTTTACGGGAGAGAAGACTGCTGGTCCCAATAATAATTCCCTCAGAGGTTATAACGTAATTGACAATATCAAGTGCAAGGTGGAGGAAGTGTGTCCCGGTGTGGTGTCATGTGCTGACATTGTAGCCATAGCCGCCCGTGACTCTGTTGTTGCTCTTGAAGGACCAAATTGGGAAGTAAAACTAGGAAGAAGGGATTCAAAGACAGCAAGCCTATCAGCTGCAAATAGTGGGAGTCTACCTCCTCCCACTTCTTCTCTTATTAATCTTATCAACAGATTCCAAGCTGTAGGTCTCTCTACCAGGGATATGGTTGCCTTATCAGGGGCACACACAATTGGGCAAGCAAGGTGTACAAGCTTCAGAACCCGCATACACAATTTGACCGACATCGACCCCTCTTTCGCTCAAAAAAGGCAAAGGAACTGCCCCAGAACTGAAGGCTCTGGAGACAACAATTTGTCCCCGTTAGACCTTCAAACTCCCCATGATTTCGACAACGCCTATTACAAGGACCTAATTGTTCAAAAGGGCCTTCTTCACTCGGATCAGCAGCTTCACAGCGGTGGATCCACTGATTCTGTTGTTGAAACTTACAGCAAAGATTCAAAGAAATTTGAATCCGATTTTGCTGCTGCTATGATCAAGATGGGTGATATTAGCCCCCTCACTGGGTCTAATGGTGAGATTAGGAAGCATTGCAGGAAGCCTAATTGA

Network for GWHGAAZE009422

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00141.24	peroxidase	51	290	2.60E-78

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00430	E1.11.1.7	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Phenylpropanoid biosynthesis	map00940

Gene Ontology

GO term	Ontology	Name
GO:0006979	biological_process	response to oxidative stress
GO:0055114	biological_process	oxidation-reduction process
GO:0042744	biological_process	hydrogen peroxide catabolic process
GO:0004601	molecular_function	peroxidase activity
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	2.757
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	59.613
	SRR3591710	White floral bud	0.441
	SRR3591711	White flower	6.997
	SRR3591712	Green floral bud	0.212
	SRR3591713	Yellow flower	12.166
SRP173429	SRR8316895	Juvenile bud stage	0.038
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.088
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.093
	SRR8316908	Gold flowering stage	1.987
SRP132670	SRR6706286	Control	0.116
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.075
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.057
	CNS0095602	Golden flower (diploid) 2	0.219
	CNS0095603	Golden flower (diploid) 3	0.150
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.014
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.059
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	16.362
	CNS0095611	Silvery flower (tetraploid) 2	7.558
	CNS0095612	Silvery flower (tetraploid) 3	1.334
	CNS0095613	Golden flower (tetraploid) 1	21.915
	CNS0095614	Golden flower (tetraploid) 2	45.016
	CNS0095615	Golden flower (tetraploid) 3	3.250
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.203
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.048
	CRR073318	Tawny withering 1	58.761
	CRR073319	Tawny withering 2	37.508
	CRR073320	Tawny withering 3	37.296