Detail information of GWHGAAZE009424


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002268300.10PREDICTED: probable serine/threonine-protein kinase WNK4 [Vitis vinifera]
Swissprottr|Q9LVL5|WNK4_ARATH0Probable serine/threonine-protein kinase WNK4
trEMBLtr|D7SJK3|D7SJK3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI15829.3}
TAIR10AT5G58350.18E-159with no lysine (K) kinase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene110037556110042601-
GWHAAZE00000002mRNA110037556110042601-
GWHAAZE00000002exon110042321110042601-
GWHAAZE00000002exon110041436110041659-
GWHAAZE00000002exon110040696110040853-
GWHAAZE00000002exon110040301110040610-
GWHAAZE00000002exon110039047110039388-
GWHAAZE00000002exon110037556110038070-
GWHAAZE00000002CDS110042321110042601-
GWHAAZE00000002CDS110041436110041659-
GWHAAZE00000002CDS110040696110040853-
GWHAAZE00000002CDS110040301110040610-
GWHAAZE00000002CDS110039047110039388-
GWHAAZE00000002CDS110037556110038070-
Transcript Sequence

Network for GWHGAAZE009424

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0190


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase62627.70E-48
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyWNK_NRBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf57.877
SRR3591706second leaf21.479
SRR3591707mature leaf94.774
SRR3591708Shoot apex16.361
SRR3591709Stem460.222
SRR3591710White floral bud26.850
SRR3591711White flower68.088
SRR3591712Green floral bud11.061
SRR3591713Yellow flower105.475
SRP173429 SRR8316895Juvenile bud stage 4.023
SRR8316896Juvenile bud stage 6.499
SRR8316897Juvenile bud stage 2.707
SRR8316894Third green stage 3.360
SRR8316900Third green stage 6.844
SRR8316901Third green stage 7.275
SRR8316898Complete white stage 4.596
SRR8316899Complete white stage 26.232
SRR8316903Complete white stage 13.504
SRR8316902Silver flowering stage14.149
SRR8316904Silver flowering stage19.559
SRR8316905Silver flowering stage7.529
SRR8316906Gold flowering stage 53.886
SRR8316907Gold flowering stage 43.636
SRR8316908Gold flowering stage 72.344
SRP132670SRR6706286Control14.344
SRR6706287Light intensity 50%8.499
SRR6706288Light intensity 20%7.582
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.680
CNS0095593Slightly white alabastrum(diploid) 26.059
CNS0095594Slightly white alabastrum(diploid) 36.520
CNS0095595Whole white alabastrum(diploid) 23.868
CNS0095596Whole white alabastrum(diploid) 32.829
CNS0095597Whole white alabastrum(diploid) 44.798
CNS0095598Silvery flower (diploied) 118.738
CNS0095599Silvery flower (diploied) 215.753
CNS0095600Silvery flower (diploied) 329.782
CNS0095601Golden flower (diploid) 118.523
CNS0095602Golden flower (diploid) 239.742
CNS0095603Golden flower (diploid) 339.708
CNS0095604Slightly white alabastrum(tetraploid) 12.956
CNS0095605Slightly white alabastrum(tetraploid) 22.374
CNS0095606Slightly white alabastrum(tetraploid) 313.444
CNS0095607Whole white alabastrum(tetraploid) 13.245
CNS0095608Whole white alabastrum(tetraploid) 21.589
CNS0095609Whole white alabastrum(tetraploid) 33.680
CNS0095610Silvery flower (tetraploid) 152.986
CNS0095611Silvery flower (tetraploid) 254.681
CNS0095612Silvery flower (tetraploid) 363.609
CNS0095613Golden flower (tetraploid) 167.007
CNS0095614Golden flower (tetraploid) 291.984
CNS0095615Golden flower (tetraploid) 3112.176
CRA001975CRR073297Stem 15.143
CRR073298Stem 26.074
CRR073299Stem 37.296
CRR073300Leaf 17.338
CRR073301Leaf 26.501
CRR073302Leaf 34.984
CRR073303Juvenile bud 15.188
CRR073304Juvenile bud 24.175
CRR073305Juvenile bud 38.807
CRR073306Third green 14.698
CRR073307Third green 25.536
CRR073308Third green 37.707
CRR073309Second white 18.996
CRR073310Second white 220.263
CRR073311Second white 320.348
CRR073312Silver flowering 118.134
CRR073313Silver flowering 212.120
CRR073314Silver flowering 319.018
CRR073315Gold flowering 128.719
CRR073316Gold flowering 251.552
CRR073317Gold flowering 324.471
CRR073318Tawny withering 155.169
CRR073319Tawny withering 265.283
CRR073320Tawny withering 354.710