Gene detail

Detail information of GWHGAAZE009511

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP45235.1	4.60865E-77	hypothetical protein JCGZ_15100 [Jatropha curcas]
Swissprot	tr\|Q9SRR7\|CML3_ARATH	3E-70	Calmodulin-like protein 3
trEMBL	tr\|A0A067LKN1\|A0A067LKN1_JATCU	2E-77	Uncharacterized protein {ECO:0000313\|EMBL:KDP45235.1}
TAIR10	AT3G07490.1	6E-47	ARF-GAP domain 11

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	111479930	111480409	-
GWHAAZE00000002	mRNA	111479930	111480409	-
GWHAAZE00000002	exon	111480155	111480409	-
GWHAAZE00000002	exon	111479930	111480124	-
GWHAAZE00000002	CDS	111480155	111480409	-
GWHAAZE00000002	CDS	111479930	111480124	-

Transcript Sequence
>GWHTAAZE009523 ATGAAGGAAATGGATCCGGCAGAGCTTAAACGCGTGTTCCAAATGTTCGATCGTAATGGGGACGGAAAGATCACAAGGAAGGAGCTGAATGACTCGTTGAAGAACTTGGGCATAATAATTCCCGAGAAAGAACTCTTCCAAATGATCGACAAGATCGACGTTAACGGGGACGGGTTCGTGGATGTGGAGGAGTTCGGGGAGTTGTACCAGACATTAATGGCAGAGACAAATGAGCCCGAGGATGAGGAAGATGATAATGGGGACGGGTTCATAACAGTGGAGGAATTGAGATCAGTGTTGGCGTCATTAGGGTTGAAACAGGGGAGGACCGTGGAGGATTGTAAGCAGATGATAATGAAGGTTGATGTTGATGGGGATGGGAAGGTTGATTATAAGGAGTTCAGACAGATGATGAAGGGTGGTGGATTTGCTGCTTTGAGTTCAAGTTAA

Network for GWHGAAZE009511

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13499.7	EF-hand_7	8	70	2.80E-12
PF13833.7	EF-hand_8	88	139	2.30E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13448	CML	Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0005509	molecular_function	calcium ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.110
	SRR3591707	mature leaf	0.291
	SRR3591708	Shoot apex	1.996
	SRR3591709	Stem	2.180
	SRR3591710	White floral bud	84.289
	SRR3591711	White flower	2.245
	SRR3591712	Green floral bud	108.660
	SRR3591713	Yellow flower	2.563
SRP173429	SRR8316895	Juvenile bud stage	2.457
	SRR8316896	Juvenile bud stage	6.035
	SRR8316897	Juvenile bud stage	2.581
	SRR8316894	Third green stage	5.980
	SRR8316900	Third green stage	81.974
	SRR8316901	Third green stage	68.058
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.684
	SRR8316903	Complete white stage	0.200
	SRR8316902	Silver flowering stage	0.777
	SRR8316904	Silver flowering stage	1.474
	SRR8316905	Silver flowering stage	0.369
	SRR8316906	Gold flowering stage	0.976
	SRR8316907	Gold flowering stage	0.173
	SRR8316908	Gold flowering stage	0.814
SRP132670	SRR6706286	Control	68.638
	SRR6706287	Light intensity 50%	64.560
	SRR6706288	Light intensity 20%	54.694
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	47.056
	CNS0095593	Slightly white alabastrum(diploid) 2	47.011
	CNS0095594	Slightly white alabastrum(diploid) 3	45.075
	CNS0095595	Whole white alabastrum(diploid) 2	148.571
	CNS0095596	Whole white alabastrum(diploid) 3	168.092
	CNS0095597	Whole white alabastrum(diploid) 4	201.443
	CNS0095598	Silvery flower (diploied) 1	2.985
	CNS0095599	Silvery flower (diploied) 2	8.535
	CNS0095600	Silvery flower (diploied) 3	1.664
	CNS0095601	Golden flower (diploid) 1	2.440
	CNS0095602	Golden flower (diploid) 2	1.179
	CNS0095603	Golden flower (diploid) 3	1.518
	CNS0095604	Slightly white alabastrum(tetraploid) 1	105.202
	CNS0095605	Slightly white alabastrum(tetraploid) 2	129.257
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.971
	CNS0095607	Whole white alabastrum(tetraploid) 1	297.365
	CNS0095608	Whole white alabastrum(tetraploid) 2	313.870
	CNS0095609	Whole white alabastrum(tetraploid) 3	148.278
	CNS0095610	Silvery flower (tetraploid) 1	1.731
	CNS0095611	Silvery flower (tetraploid) 2	6.050
	CNS0095612	Silvery flower (tetraploid) 3	12.358
	CNS0095613	Golden flower (tetraploid) 1	3.461
	CNS0095614	Golden flower (tetraploid) 2	2.142
	CNS0095615	Golden flower (tetraploid) 3	8.207
CRA001975	CRR073297	Stem 1	4.750
	CRR073298	Stem 2	6.332
	CRR073299	Stem 3	0.924
	CRR073300	Leaf 1	53.577
	CRR073301	Leaf 2	34.931
	CRR073302	Leaf 3	20.330
	CRR073303	Juvenile bud 1	48.041
	CRR073304	Juvenile bud 2	38.809
	CRR073305	Juvenile bud 3	0.623
	CRR073306	Third green 1	11.719
	CRR073307	Third green 2	12.629
	CRR073308	Third green 3	11.230
	CRR073309	Second white 1	1.020
	CRR073310	Second white 2	3.631
	CRR073311	Second white 3	2.719
	CRR073312	Silver flowering 1	8.420
	CRR073313	Silver flowering 2	10.911
	CRR073314	Silver flowering 3	4.745
	CRR073315	Gold flowering 1	6.272
	CRR073316	Gold flowering 2	2.702
	CRR073317	Gold flowering 3	3.453
	CRR073318	Tawny withering 1	8.537
	CRR073319	Tawny withering 2	9.096
	CRR073320	Tawny withering 3	4.853