Detail information of GWHGAAZE009544


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009602562.10PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosiformis]
Swissprottr|Q38931|FKB62_ARATH0Peptidyl-prolyl cis-trans isomerase FKBP62
trEMBLtr|A0A061DUX9|A0A061DUX9_THECC0Rotamase FKBP 1 isoform 1 {ECO:0000313|EMBL:EOX93803.1}
TAIR10AT3G25230.10rotamase FKBP 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene112111879112118625-
GWHAAZE00000002mRNA112111879112118625-
GWHAAZE00000002exon112111879112111929-
GWHAAZE00000002exon112112014112112125-
GWHAAZE00000002exon112112379112112506-
GWHAAZE00000002exon112112593112112739-
GWHAAZE00000002exon112112834112112956-
GWHAAZE00000002exon112113216112113391-
GWHAAZE00000002exon112113471112113563-
GWHAAZE00000002exon112113643112113837-
GWHAAZE00000002exon112113932112114012-
GWHAAZE00000002exon112114105112114179-
GWHAAZE00000002exon112114354112114614-
GWHAAZE00000002exon112116025112116111-
GWHAAZE00000002exon112118442112118625-
GWHAAZE00000002CDS112118442112118625-
GWHAAZE00000002CDS112116025112116111-
GWHAAZE00000002CDS112114354112114614-
GWHAAZE00000002CDS112114105112114179-
GWHAAZE00000002CDS112113932112114012-
GWHAAZE00000002CDS112113643112113837-
GWHAAZE00000002CDS112113471112113563-
GWHAAZE00000002CDS112113216112113391-
GWHAAZE00000002CDS112112834112112956-
GWHAAZE00000002CDS112112593112112739-
GWHAAZE00000002CDS112112379112112506-
GWHAAZE00000002CDS112112014112112125-
GWHAAZE00000002CDS112111879112111929-
Transcript Sequence

Network for GWHGAAZE009544

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00254.29FKBP_C541429.30E-35
PF00254.29FKBP_C1682587.00E-16
PF00254.29FKBP_C2843802.00E-19
PF13181.7TPR_84845160.00021
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09571FKBP4_5 Estrogen signaling pathway map04915

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding
GO:0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf124.484
SRR3591706second leaf37.450
SRR3591707mature leaf28.209
SRR3591708Shoot apex68.934
SRR3591709Stem80.931
SRR3591710White floral bud27.036
SRR3591711White flower25.556
SRR3591712Green floral bud49.106
SRR3591713Yellow flower10.990
SRP173429 SRR8316895Juvenile bud stage 90.158
SRR8316896Juvenile bud stage 191.979
SRR8316897Juvenile bud stage 70.209
SRR8316894Third green stage 30.454
SRR8316900Third green stage 76.357
SRR8316901Third green stage 57.246
SRR8316898Complete white stage 6.505
SRR8316899Complete white stage 41.733
SRR8316903Complete white stage 14.788
SRR8316902Silver flowering stage11.947
SRR8316904Silver flowering stage9.199
SRR8316905Silver flowering stage6.725
SRR8316906Gold flowering stage 38.491
SRR8316907Gold flowering stage 29.028
SRR8316908Gold flowering stage 16.947
SRP132670SRR6706286Control84.213
SRR6706287Light intensity 50%72.235
SRR6706288Light intensity 20%71.182
CNP0000432CNS0095592Slightly white alabastrum(diploid) 172.957
CNS0095593Slightly white alabastrum(diploid) 261.769
CNS0095594Slightly white alabastrum(diploid) 373.294
CNS0095595Whole white alabastrum(diploid) 251.731
CNS0095596Whole white alabastrum(diploid) 343.642
CNS0095597Whole white alabastrum(diploid) 442.738
CNS0095598Silvery flower (diploied) 190.446
CNS0095599Silvery flower (diploied) 2294.254
CNS0095600Silvery flower (diploied) 3115.454
CNS0095601Golden flower (diploid) 1453.908
CNS0095602Golden flower (diploid) 2163.833
CNS0095603Golden flower (diploid) 3164.042
CNS0095604Slightly white alabastrum(tetraploid) 196.988
CNS0095605Slightly white alabastrum(tetraploid) 284.236
CNS0095606Slightly white alabastrum(tetraploid) 3166.369
CNS0095607Whole white alabastrum(tetraploid) 152.798
CNS0095608Whole white alabastrum(tetraploid) 233.161
CNS0095609Whole white alabastrum(tetraploid) 3113.439
CNS0095610Silvery flower (tetraploid) 149.509
CNS0095611Silvery flower (tetraploid) 274.613
CNS0095612Silvery flower (tetraploid) 369.841
CNS0095613Golden flower (tetraploid) 157.154
CNS0095614Golden flower (tetraploid) 267.433
CNS0095615Golden flower (tetraploid) 310.586
CRA001975CRR073297Stem 155.703
CRR073298Stem 245.401
CRR073299Stem 347.244
CRR073300Leaf 146.782
CRR073301Leaf 245.096
CRR073302Leaf 334.237
CRR073303Juvenile bud 142.957
CRR073304Juvenile bud 224.009
CRR073305Juvenile bud 347.495
CRR073306Third green 112.641
CRR073307Third green 27.199
CRR073308Third green 310.191
CRR073309Second white 17.635
CRR073310Second white 29.157
CRR073311Second white 37.658
CRR073312Silver flowering 14.287
CRR073313Silver flowering 24.600
CRR073314Silver flowering 33.675
CRR073315Gold flowering 123.043
CRR073316Gold flowering 231.427
CRR073317Gold flowering 321.355
CRR073318Tawny withering 157.705
CRR073319Tawny withering 247.554
CRR073320Tawny withering 370.741