Detail information of GWHGAAZE009545


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP03934.14.36162E-86unnamed protein product [Coffea canephora]
Swissprottr|Q41649|FKB15_VICFA5E-77FK506-binding protein 2 (Precursor)
trEMBLtr|A0A068U6W5|A0A068U6W5_COFCA2E-86Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}
TAIR10AT5G48580.14E-58FK506- and rapamycin-binding protein 15 kD-2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene112136727112141434-
GWHAAZE00000002mRNA112136727112141434-
GWHAAZE00000002exon112136727112137006-
GWHAAZE00000002exon112138111112138215-
GWHAAZE00000002exon112138705112138795-
GWHAAZE00000002exon112139762112139824-
GWHAAZE00000002exon112141090112141139-
GWHAAZE00000002exon112141377112141434-
GWHAAZE00000002CDS112141377112141434-
GWHAAZE00000002CDS112141090112141139-
GWHAAZE00000002CDS112139762112139824-
GWHAAZE00000002CDS112138705112138795-
GWHAAZE00000002CDS112138111112138215-
GWHAAZE00000002CDS112136918112137006-
GWHAAZE00000002three_prime_UTR112136727112136917-
Transcript Sequence

Network for GWHGAAZE009545

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0187


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00254.29FKBP_C441341.70E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf228.942
SRR3591706second leaf92.400
SRR3591707mature leaf63.743
SRR3591708Shoot apex175.345
SRR3591709Stem139.374
SRR3591710White floral bud171.977
SRR3591711White flower128.360
SRR3591712Green floral bud223.176
SRR3591713Yellow flower192.624
SRP173429 SRR8316895Juvenile bud stage 97.891
SRR8316896Juvenile bud stage 143.347
SRR8316897Juvenile bud stage 66.732
SRR8316894Third green stage 66.273
SRR8316900Third green stage 235.147
SRR8316901Third green stage 230.368
SRR8316898Complete white stage 85.885
SRR8316899Complete white stage 190.917
SRR8316903Complete white stage 116.389
SRR8316902Silver flowering stage80.261
SRR8316904Silver flowering stage98.852
SRR8316905Silver flowering stage57.718
SRR8316906Gold flowering stage 160.946
SRR8316907Gold flowering stage 169.498
SRR8316908Gold flowering stage 140.315
SRP132670SRR6706286Control243.659
SRR6706287Light intensity 50%252.127
SRR6706288Light intensity 20%273.052
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1249.560
CNS0095593Slightly white alabastrum(diploid) 2258.402
CNS0095594Slightly white alabastrum(diploid) 3264.116
CNS0095595Whole white alabastrum(diploid) 2258.112
CNS0095596Whole white alabastrum(diploid) 3298.738
CNS0095597Whole white alabastrum(diploid) 4236.327
CNS0095598Silvery flower (diploied) 1189.902
CNS0095599Silvery flower (diploied) 2147.805
CNS0095600Silvery flower (diploied) 3121.174
CNS0095601Golden flower (diploid) 1135.452
CNS0095602Golden flower (diploid) 2163.998
CNS0095603Golden flower (diploid) 3162.971
CNS0095604Slightly white alabastrum(tetraploid) 1249.944
CNS0095605Slightly white alabastrum(tetraploid) 2269.564
CNS0095606Slightly white alabastrum(tetraploid) 3232.751
CNS0095607Whole white alabastrum(tetraploid) 1248.335
CNS0095608Whole white alabastrum(tetraploid) 2257.801
CNS0095609Whole white alabastrum(tetraploid) 3304.099
CNS0095610Silvery flower (tetraploid) 1215.704
CNS0095611Silvery flower (tetraploid) 2111.912
CNS0095612Silvery flower (tetraploid) 3109.634
CNS0095613Golden flower (tetraploid) 1165.279
CNS0095614Golden flower (tetraploid) 2182.812
CNS0095615Golden flower (tetraploid) 3112.327
CRA001975CRR073297Stem 1107.243
CRR073298Stem 2115.432
CRR073299Stem 3124.225
CRR073300Leaf 1151.773
CRR073301Leaf 2143.579
CRR073302Leaf 3179.758
CRR073303Juvenile bud 1124.415
CRR073304Juvenile bud 2158.202
CRR073305Juvenile bud 369.005
CRR073306Third green 142.548
CRR073307Third green 264.523
CRR073308Third green 347.035
CRR073309Second white 151.547
CRR073310Second white 233.521
CRR073311Second white 322.632
CRR073312Silver flowering 154.321
CRR073313Silver flowering 266.965
CRR073314Silver flowering 362.859
CRR073315Gold flowering 149.701
CRR073316Gold flowering 245.854
CRR073317Gold flowering 333.365
CRR073318Tawny withering 1102.614
CRR073319Tawny withering 2100.350
CRR073320Tawny withering 388.405