Detail information of GWHGAAZE009548


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006367000.11.1152E-158PREDICTED: uncharacterized protein LOC102582294 [Solanum tuberosum]
trEMBLtr|M1AGU9|M1AGU9_SOLTU4E-159Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400022519}
TAIR10AT3G07310.15E-98Protein of unknown function (DUF760)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene112162409112165218+
GWHAAZE00000002mRNA112162409112165218+
GWHAAZE00000002exon112162409112162946+
GWHAAZE00000002exon112164423112165218+
GWHAAZE00000002five_prime_UTR112162409112162560+
GWHAAZE00000002CDS112162561112162946+
GWHAAZE00000002CDS112164423112165218+
Transcript Sequence

Network for GWHGAAZE009548

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05542.12DUF7601272542.80E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf28.598
SRR3591706second leaf10.424
SRR3591707mature leaf43.143
SRR3591708Shoot apex19.303
SRR3591709Stem40.376
SRR3591710White floral bud32.283
SRR3591711White flower41.228
SRR3591712Green floral bud9.891
SRR3591713Yellow flower56.359
SRP173429 SRR8316895Juvenile bud stage 3.704
SRR8316896Juvenile bud stage 7.355
SRR8316897Juvenile bud stage 2.343
SRR8316894Third green stage 3.954
SRR8316900Third green stage 9.881
SRR8316901Third green stage 8.615
SRR8316898Complete white stage 17.692
SRR8316899Complete white stage 19.925
SRR8316903Complete white stage 26.586
SRR8316902Silver flowering stage25.349
SRR8316904Silver flowering stage33.535
SRR8316905Silver flowering stage23.247
SRR8316906Gold flowering stage 58.604
SRR8316907Gold flowering stage 46.486
SRR8316908Gold flowering stage 48.885
SRP132670SRR6706286Control15.534
SRR6706287Light intensity 50%13.378
SRR6706288Light intensity 20%13.044
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.106
CNS0095593Slightly white alabastrum(diploid) 26.737
CNS0095594Slightly white alabastrum(diploid) 35.278
CNS0095595Whole white alabastrum(diploid) 26.172
CNS0095596Whole white alabastrum(diploid) 35.881
CNS0095597Whole white alabastrum(diploid) 45.065
CNS0095598Silvery flower (diploied) 134.701
CNS0095599Silvery flower (diploied) 234.272
CNS0095600Silvery flower (diploied) 3100.517
CNS0095601Golden flower (diploid) 163.928
CNS0095602Golden flower (diploid) 2117.608
CNS0095603Golden flower (diploid) 3114.215
CNS0095604Slightly white alabastrum(tetraploid) 15.873
CNS0095605Slightly white alabastrum(tetraploid) 25.636
CNS0095606Slightly white alabastrum(tetraploid) 39.460
CNS0095607Whole white alabastrum(tetraploid) 14.010
CNS0095608Whole white alabastrum(tetraploid) 23.831
CNS0095609Whole white alabastrum(tetraploid) 39.558
CNS0095610Silvery flower (tetraploid) 166.119
CNS0095611Silvery flower (tetraploid) 2119.044
CNS0095612Silvery flower (tetraploid) 346.498
CNS0095613Golden flower (tetraploid) 131.883
CNS0095614Golden flower (tetraploid) 284.263
CNS0095615Golden flower (tetraploid) 3133.276
CRA001975CRR073297Stem 125.663
CRR073298Stem 221.583
CRR073299Stem 328.731
CRR073300Leaf 115.696
CRR073301Leaf 218.006
CRR073302Leaf 316.397
CRR073303Juvenile bud 117.417
CRR073304Juvenile bud 216.168
CRR073305Juvenile bud 321.991
CRR073306Third green 115.445
CRR073307Third green 217.080
CRR073308Third green 313.900
CRR073309Second white 18.777
CRR073310Second white 26.770
CRR073311Second white 36.732
CRR073312Silver flowering 13.584
CRR073313Silver flowering 26.630
CRR073314Silver flowering 35.386
CRR073315Gold flowering 197.534
CRR073316Gold flowering 2140.639
CRR073317Gold flowering 3134.822
CRR073318Tawny withering 160.994
CRR073319Tawny withering 220.021
CRR073320Tawny withering 349.985