Detail information of GWHGAAZE009553


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007201006.10hypothetical protein PRUPE_ppa005313mg [Prunus persica]
Swissprottr|Q8VYU3|GCH1_SOLLC0GTP cyclohydrolase 1 {ECO:0000305}
trEMBLtr|M5W5Y8|M5W5Y8_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ02205.1}
TAIR10AT3G07270.13E-150GTP cyclohydrolase I

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene112232410112235394-
GWHAAZE00000002mRNA112232410112235394-
GWHAAZE00000002exon112232410112233569-
GWHAAZE00000002exon112234309112234368-
GWHAAZE00000002exon112235181112235394-
GWHAAZE00000002CDS112235181112235394-
GWHAAZE00000002CDS112234309112234368-
GWHAAZE00000002CDS112232410112233569-
Transcript Sequence

Network for GWHGAAZE009553

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01227.23GTP_cyclohydroI35744.30E-06
PF01227.23GTP_cyclohydroI1222071.10E-23
PF01227.23GTP_cyclohydroI2894708.00E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01495GCH1, folE Metabolic pathways map01100
Folate biosynthesismap00790

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf32.288
SRR3591706second leaf49.254
SRR3591707mature leaf41.826
SRR3591708Shoot apex25.358
SRR3591709Stem14.897
SRR3591710White floral bud21.557
SRR3591711White flower19.210
SRR3591712Green floral bud28.091
SRR3591713Yellow flower20.696
SRP173429 SRR8316895Juvenile bud stage 11.414
SRR8316896Juvenile bud stage 13.596
SRR8316897Juvenile bud stage 6.608
SRR8316894Third green stage 7.647
SRR8316900Third green stage 29.499
SRR8316901Third green stage 24.827
SRR8316898Complete white stage 9.144
SRR8316899Complete white stage 23.487
SRR8316903Complete white stage 15.222
SRR8316902Silver flowering stage6.976
SRR8316904Silver flowering stage10.703
SRR8316905Silver flowering stage5.565
SRR8316906Gold flowering stage 21.278
SRR8316907Gold flowering stage 25.794
SRR8316908Gold flowering stage 28.848
SRP132670SRR6706286Control21.674
SRR6706287Light intensity 50%22.719
SRR6706288Light intensity 20%26.198
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.151
CNS0095593Slightly white alabastrum(diploid) 218.789
CNS0095594Slightly white alabastrum(diploid) 313.139
CNS0095595Whole white alabastrum(diploid) 216.981
CNS0095596Whole white alabastrum(diploid) 319.083
CNS0095597Whole white alabastrum(diploid) 415.141
CNS0095598Silvery flower (diploied) 113.368
CNS0095599Silvery flower (diploied) 29.677
CNS0095600Silvery flower (diploied) 316.861
CNS0095601Golden flower (diploid) 110.228
CNS0095602Golden flower (diploid) 223.194
CNS0095603Golden flower (diploid) 320.715
CNS0095604Slightly white alabastrum(tetraploid) 120.629
CNS0095605Slightly white alabastrum(tetraploid) 216.209
CNS0095606Slightly white alabastrum(tetraploid) 328.520
CNS0095607Whole white alabastrum(tetraploid) 116.980
CNS0095608Whole white alabastrum(tetraploid) 215.321
CNS0095609Whole white alabastrum(tetraploid) 324.346
CNS0095610Silvery flower (tetraploid) 113.078
CNS0095611Silvery flower (tetraploid) 212.195
CNS0095612Silvery flower (tetraploid) 313.814
CNS0095613Golden flower (tetraploid) 114.382
CNS0095614Golden flower (tetraploid) 222.294
CNS0095615Golden flower (tetraploid) 339.508
CRA001975CRR073297Stem 124.160
CRR073298Stem 222.813
CRR073299Stem 323.960
CRR073300Leaf 130.526
CRR073301Leaf 230.353
CRR073302Leaf 331.620
CRR073303Juvenile bud 133.064
CRR073304Juvenile bud 228.344
CRR073305Juvenile bud 336.565
CRR073306Third green 139.585
CRR073307Third green 233.442
CRR073308Third green 337.363
CRR073309Second white 147.150
CRR073310Second white 229.891
CRR073311Second white 330.474
CRR073312Silver flowering 181.223
CRR073313Silver flowering 287.832
CRR073314Silver flowering 382.015
CRR073315Gold flowering 128.382
CRR073316Gold flowering 233.940
CRR073317Gold flowering 337.604
CRR073318Tawny withering 125.730
CRR073319Tawny withering 223.862
CRR073320Tawny withering 332.526