Detail information of GWHGAAZE009572


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008235444.16.59452E-34PREDICTED: uncharacterized protein LOC103334279 [Prunus mume]
trEMBLtr|M5VL02|M5VL02_PRUPE4E-34Uncharacterized protein {ECO:0000313|EMBL:EMJ01834.1}
TAIR10AT1G48140.13E-27dolichol-phosphate mannosyltransferase-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene112620648112621320+
GWHAAZE00000002mRNA112620648112621320+
GWHAAZE00000002exon112620648112620728+
GWHAAZE00000002exon112620840112620947+
GWHAAZE00000002exon112621024112621065+
GWHAAZE00000002exon112621144112621320+
GWHAAZE00000002CDS112620648112620728+
GWHAAZE00000002CDS112620840112620947+
GWHAAZE00000002CDS112621024112621065+
GWHAAZE00000002CDS112621144112621320+
Transcript Sequence

Network for GWHGAAZE009572

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08285.12DPM32631.00E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09659DPM3 Metabolic pathways map01100
N-Glycan biosynthesismap00510

Gene Ontology

GO term OntologyName
GO:0006486biological_processprotein glycosylation

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.503
SRR3591706second leaf9.558
SRR3591707mature leaf12.435
SRR3591708Shoot apex16.390
SRR3591709Stem23.265
SRR3591710White floral bud24.821
SRR3591711White flower25.047
SRR3591712Green floral bud24.223
SRR3591713Yellow flower31.348
SRP173429 SRR8316895Juvenile bud stage 13.360
SRR8316896Juvenile bud stage 16.152
SRR8316897Juvenile bud stage 7.226
SRR8316894Third green stage 7.017
SRR8316900Third green stage 27.214
SRR8316901Third green stage 22.026
SRR8316898Complete white stage 10.064
SRR8316899Complete white stage 30.297
SRR8316903Complete white stage 17.902
SRR8316902Silver flowering stage9.851
SRR8316904Silver flowering stage13.417
SRR8316905Silver flowering stage8.031
SRR8316906Gold flowering stage 30.846
SRR8316907Gold flowering stage 34.169
SRR8316908Gold flowering stage 28.999
SRP132670SRR6706286Control18.387
SRR6706287Light intensity 50%21.550
SRR6706288Light intensity 20%22.078
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.830
CNS0095593Slightly white alabastrum(diploid) 219.632
CNS0095594Slightly white alabastrum(diploid) 318.154
CNS0095595Whole white alabastrum(diploid) 219.712
CNS0095596Whole white alabastrum(diploid) 320.876
CNS0095597Whole white alabastrum(diploid) 419.773
CNS0095598Silvery flower (diploied) 121.519
CNS0095599Silvery flower (diploied) 221.212
CNS0095600Silvery flower (diploied) 319.197
CNS0095601Golden flower (diploid) 114.956
CNS0095602Golden flower (diploid) 221.035
CNS0095603Golden flower (diploid) 318.427
CNS0095604Slightly white alabastrum(tetraploid) 116.195
CNS0095605Slightly white alabastrum(tetraploid) 216.228
CNS0095606Slightly white alabastrum(tetraploid) 321.564
CNS0095607Whole white alabastrum(tetraploid) 120.299
CNS0095608Whole white alabastrum(tetraploid) 215.492
CNS0095609Whole white alabastrum(tetraploid) 314.208
CNS0095610Silvery flower (tetraploid) 118.483
CNS0095611Silvery flower (tetraploid) 219.514
CNS0095612Silvery flower (tetraploid) 322.990
CNS0095613Golden flower (tetraploid) 121.000
CNS0095614Golden flower (tetraploid) 219.296
CNS0095615Golden flower (tetraploid) 319.417
CRA001975CRR073297Stem 113.804
CRR073298Stem 216.998
CRR073299Stem 314.472
CRR073300Leaf 117.898
CRR073301Leaf 216.607
CRR073302Leaf 313.783
CRR073303Juvenile bud 119.752
CRR073304Juvenile bud 216.696
CRR073305Juvenile bud 311.771
CRR073306Third green 111.965
CRR073307Third green 28.502
CRR073308Third green 311.690
CRR073309Second white 113.529
CRR073310Second white 29.095
CRR073311Second white 37.583
CRR073312Silver flowering 17.637
CRR073313Silver flowering 29.798
CRR073314Silver flowering 38.399
CRR073315Gold flowering 15.580
CRR073316Gold flowering 29.408
CRR073317Gold flowering 33.398
CRR073318Tawny withering 111.712
CRR073319Tawny withering 211.172
CRR073320Tawny withering 311.198