Detail information of GWHGAAZE009587


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004247081.11.33049E-40PREDICTED: uncharacterized protein LOC101254727 [Solanum lycopersicum]
Swissprottr|Q8LA32|LUL4_ARATH0.0000001Probable E3 ubiquitin-protein ligase LUL4
trEMBLtr|K4CTT2|K4CTT2_SOLLC5E-41Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc09g059990.1.1}
TAIR10AT3G25030.24E-28RING/U-box superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene112921704112922108-
GWHAAZE00000002mRNA112921704112922108-
GWHAAZE00000002exon112921704112922108-
GWHAAZE00000002CDS112921704112922108-
Transcript Sequence

Network for GWHGAAZE009587

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13920.7zf-C3HC4_3831273.70E-11
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.583
SRR3591706second leaf18.594
SRR3591707mature leaf17.920
SRR3591708Shoot apex25.859
SRR3591709Stem33.072
SRR3591710White floral bud20.237
SRR3591711White flower13.506
SRR3591712Green floral bud28.905
SRR3591713Yellow flower53.967
SRP173429 SRR8316895Juvenile bud stage 4.701
SRR8316896Juvenile bud stage 5.872
SRR8316897Juvenile bud stage 4.868
SRR8316894Third green stage 4.286
SRR8316900Third green stage 22.994
SRR8316901Third green stage 21.347
SRR8316898Complete white stage 1.450
SRR8316899Complete white stage 4.575
SRR8316903Complete white stage 2.141
SRR8316902Silver flowering stage4.038
SRR8316904Silver flowering stage4.178
SRR8316905Silver flowering stage3.068
SRR8316906Gold flowering stage 18.802
SRR8316907Gold flowering stage 18.202
SRR8316908Gold flowering stage 23.153
SRP132670SRR6706286Control11.692
SRR6706287Light intensity 50%12.933
SRR6706288Light intensity 20%10.202
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.740
CNS0095593Slightly white alabastrum(diploid) 220.252
CNS0095594Slightly white alabastrum(diploid) 327.900
CNS0095595Whole white alabastrum(diploid) 244.217
CNS0095596Whole white alabastrum(diploid) 359.330
CNS0095597Whole white alabastrum(diploid) 465.691
CNS0095598Silvery flower (diploied) 110.433
CNS0095599Silvery flower (diploied) 210.595
CNS0095600Silvery flower (diploied) 39.508
CNS0095601Golden flower (diploid) 112.967
CNS0095602Golden flower (diploid) 219.601
CNS0095603Golden flower (diploid) 321.565
CNS0095604Slightly white alabastrum(tetraploid) 130.209
CNS0095605Slightly white alabastrum(tetraploid) 235.497
CNS0095606Slightly white alabastrum(tetraploid) 310.806
CNS0095607Whole white alabastrum(tetraploid) 161.875
CNS0095608Whole white alabastrum(tetraploid) 264.552
CNS0095609Whole white alabastrum(tetraploid) 335.202
CNS0095610Silvery flower (tetraploid) 113.142
CNS0095611Silvery flower (tetraploid) 210.707
CNS0095612Silvery flower (tetraploid) 311.173
CNS0095613Golden flower (tetraploid) 125.750
CNS0095614Golden flower (tetraploid) 225.020
CNS0095615Golden flower (tetraploid) 318.602
CRA001975CRR073297Stem 118.309
CRR073298Stem 224.336
CRR073299Stem 322.317
CRR073300Leaf 128.755
CRR073301Leaf 221.997
CRR073302Leaf 314.063
CRR073303Juvenile bud 116.372
CRR073304Juvenile bud 29.361
CRR073305Juvenile bud 34.850
CRR073306Third green 15.681
CRR073307Third green 25.886
CRR073308Third green 35.624
CRR073309Second white 16.689
CRR073310Second white 29.673
CRR073311Second white 39.377
CRR073312Silver flowering 136.589
CRR073313Silver flowering 226.315
CRR073314Silver flowering 338.077
CRR073315Gold flowering 18.699
CRR073316Gold flowering 214.628
CRR073317Gold flowering 313.789
CRR073318Tawny withering 145.259
CRR073319Tawny withering 224.269
CRR073320Tawny withering 331.084