Detail information of GWHGAAZE009598


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002267492.10PREDICTED: uncharacterized vacuolar membrane protein YML018C [Vitis vinifera]
Swissprottr|Q9SFT7|Y3707_ARATH3E-151Serine/threonine-protein kinase At3g07070
trEMBLtr|F6I017|F6I017_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB60283.1}
TAIR10AT3G07080.16E-137EamA-like transporter family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene113259846113270108-
GWHAAZE00000002mRNA113259846113270108-
GWHAAZE00000002exon113269991113270108-
GWHAAZE00000002exon113267991113268226-
GWHAAZE00000002exon113267703113267892-
GWHAAZE00000002exon113267040113267431-
GWHAAZE00000002exon113261917113262489-
GWHAAZE00000002exon113261057113261483-
GWHAAZE00000002exon113259846113260144-
GWHAAZE00000002CDS113269991113270108-
GWHAAZE00000002CDS113267991113268226-
GWHAAZE00000002CDS113267703113267892-
GWHAAZE00000002CDS113267040113267431-
GWHAAZE00000002CDS113261917113262489-
GWHAAZE00000002CDS113261057113261483-
GWHAAZE00000002CDS113259846113260144-
Transcript Sequence

Network for GWHGAAZE009598

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase983074.80E-46
PF06027.13SLC35F4976114.60E-10
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0055085biological_processtransmembrane transport
GO:0016021cellular_componentintegral component of membrane
GO:0005524molecular_functionATP binding
GO:0004674molecular_functionprotein serine/threonine kinase activity
GO:0004672molecular_functionprotein kinase activity
GO:0022857molecular_functiontransmembrane transporter activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.173
SRR3591706second leaf5.445
SRR3591707mature leaf5.208
SRR3591708Shoot apex7.651
SRR3591709Stem8.848
SRR3591710White floral bud28.114
SRR3591711White flower6.763
SRR3591712Green floral bud24.368
SRR3591713Yellow flower4.018
SRP173429 SRR8316895Juvenile bud stage 7.546
SRR8316896Juvenile bud stage 10.600
SRR8316897Juvenile bud stage 6.679
SRR8316894Third green stage 5.579
SRR8316900Third green stage 26.292
SRR8316901Third green stage 24.040
SRR8316898Complete white stage 4.793
SRR8316899Complete white stage 19.818
SRR8316903Complete white stage 6.644
SRR8316902Silver flowering stage1.702
SRR8316904Silver flowering stage3.492
SRR8316905Silver flowering stage1.371
SRR8316906Gold flowering stage 3.476
SRR8316907Gold flowering stage 2.511
SRR8316908Gold flowering stage 2.757
SRP132670SRR6706286Control12.283
SRR6706287Light intensity 50%13.877
SRR6706288Light intensity 20%14.335
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.410
CNS0095593Slightly white alabastrum(diploid) 214.456
CNS0095594Slightly white alabastrum(diploid) 311.296
CNS0095595Whole white alabastrum(diploid) 234.726
CNS0095596Whole white alabastrum(diploid) 337.461
CNS0095597Whole white alabastrum(diploid) 440.266
CNS0095598Silvery flower (diploied) 112.174
CNS0095599Silvery flower (diploied) 213.191
CNS0095600Silvery flower (diploied) 38.625
CNS0095601Golden flower (diploid) 112.484
CNS0095602Golden flower (diploid) 28.681
CNS0095603Golden flower (diploid) 38.813
CNS0095604Slightly white alabastrum(tetraploid) 118.359
CNS0095605Slightly white alabastrum(tetraploid) 219.311
CNS0095606Slightly white alabastrum(tetraploid) 39.659
CNS0095607Whole white alabastrum(tetraploid) 135.326
CNS0095608Whole white alabastrum(tetraploid) 242.867
CNS0095609Whole white alabastrum(tetraploid) 328.706
CNS0095610Silvery flower (tetraploid) 14.137
CNS0095611Silvery flower (tetraploid) 27.026
CNS0095612Silvery flower (tetraploid) 311.812
CNS0095613Golden flower (tetraploid) 11.409
CNS0095614Golden flower (tetraploid) 23.029
CNS0095615Golden flower (tetraploid) 33.376
CRA001975CRR073297Stem 18.600
CRR073298Stem 27.201
CRR073299Stem 35.970
CRR073300Leaf 121.434
CRR073301Leaf 215.922
CRR073302Leaf 311.786
CRR073303Juvenile bud 114.560
CRR073304Juvenile bud 212.195
CRR073305Juvenile bud 38.687
CRR073306Third green 15.412
CRR073307Third green 26.035
CRR073308Third green 36.762
CRR073309Second white 12.359
CRR073310Second white 22.388
CRR073311Second white 31.063
CRR073312Silver flowering 14.681
CRR073313Silver flowering 24.685
CRR073314Silver flowering 33.806
CRR073315Gold flowering 114.260
CRR073316Gold flowering 28.903
CRR073317Gold flowering 36.330
CRR073318Tawny withering 110.844
CRR073319Tawny withering 29.902
CRR073320Tawny withering 311.817