Detail information of GWHGAAZE009611


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011080160.10PREDICTED: B3 domain-containing transcription factor ABI3 isoform X1 [Sesamum indicum]
Swissprottr|Q01593|ABI3_ARATH3E-147B3 domain-containing transcription factor ABI3
trEMBLtr|V4TTV1|V4TTV1_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR56902.1}
TAIR10AT3G24650.17E-105AP2/B3-like transcriptional factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene113557515113561140-
GWHAAZE00000002mRNA113557515113561140-
GWHAAZE00000002exon113557515113557652-
GWHAAZE00000002exon113558077113558153-
GWHAAZE00000002exon113558256113558302-
GWHAAZE00000002exon113558413113558513-
GWHAAZE00000002exon113558660113558752-
GWHAAZE00000002exon113559488113561140-
GWHAAZE00000002CDS113559488113561140-
GWHAAZE00000002CDS113558660113558752-
GWHAAZE00000002CDS113558413113558513-
GWHAAZE00000002CDS113558256113558302-
GWHAAZE00000002CDS113558077113558153-
GWHAAZE00000002CDS113557515113557652-
Transcript Sequence

Network for GWHGAAZE009611

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.22B35646594.50E-17
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.324
SRR3591707mature leaf0.055
SRR3591708Shoot apex0.273
SRR3591709Stem0.076
SRR3591710White floral bud0.588
SRR3591711White flower0.056
SRR3591712Green floral bud0.997
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.446
SRR8316896Juvenile bud stage 1.135
SRR8316897Juvenile bud stage 0.390
SRR8316894Third green stage 0.449
SRR8316900Third green stage 0.962
SRR8316901Third green stage 1.423
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.838
SRR6706287Light intensity 50%0.624
SRR6706288Light intensity 20%0.471
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.913
CNS0095593Slightly white alabastrum(diploid) 21.014
CNS0095594Slightly white alabastrum(diploid) 31.376
CNS0095595Whole white alabastrum(diploid) 20.924
CNS0095596Whole white alabastrum(diploid) 31.938
CNS0095597Whole white alabastrum(diploid) 40.562
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 11.354
CNS0095605Slightly white alabastrum(tetraploid) 22.200
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.836
CNS0095608Whole white alabastrum(tetraploid) 20.839
CNS0095609Whole white alabastrum(tetraploid) 30.448
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.021
CNS0095612Silvery flower (tetraploid) 30.031
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.542
CRR073298Stem 20.334
CRR073299Stem 30.514
CRR073300Leaf 10.329
CRR073301Leaf 20.735
CRR073302Leaf 30.300
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.004
CRR073307Third green 20.002
CRR073308Third green 30.023
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.167
CRR073314Silver flowering 30.001
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.003
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.001