Detail information of GWHGAAZE009675


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAEC32109.10ABC transporter family protein [Camellia sinensis]
Swissprottr|Q3EDJ0|AB19I_ARATH3E-161ABC transporter I family member 19
trEMBLtr|F5A834|F5A834_CAMSI0ABC transporter family protein {ECO:0000313|EMBL:AEC32109.1}
TAIR10AT1G03905.19E-128P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene114807342114811102-
GWHAAZE00000002mRNA114807342114811102-
GWHAAZE00000002exon114807342114807629-
GWHAAZE00000002exon114807883114807969-
GWHAAZE00000002exon114808197114808333-
GWHAAZE00000002exon114808863114808914-
GWHAAZE00000002exon114809119114809279-
GWHAAZE00000002exon114810961114811102-
GWHAAZE00000002CDS114810961114811102-
GWHAAZE00000002CDS114809119114809279-
GWHAAZE00000002CDS114808863114808914-
GWHAAZE00000002CDS114808197114808333-
GWHAAZE00000002CDS114807883114807969-
GWHAAZE00000002CDS114807342114807629-
Transcript Sequence

Network for GWHGAAZE009675

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00005.28ABC_tran281722.60E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12608CAF16 RNA degradation map03018

Gene Ontology

GO term OntologyName
GO:0005524molecular_functionATP binding
GO:0016887molecular_functionATPase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf143.861
SRR3591706second leaf103.978
SRR3591707mature leaf63.138
SRR3591708Shoot apex116.973
SRR3591709Stem107.382
SRR3591710White floral bud51.190
SRR3591711White flower63.783
SRR3591712Green floral bud77.998
SRR3591713Yellow flower30.341
SRP173429 SRR8316895Juvenile bud stage 51.759
SRR8316896Juvenile bud stage 45.424
SRR8316897Juvenile bud stage 30.179
SRR8316894Third green stage 22.907
SRR8316900Third green stage 83.321
SRR8316901Third green stage 88.055
SRR8316898Complete white stage 37.417
SRR8316899Complete white stage 99.326
SRR8316903Complete white stage 52.982
SRR8316902Silver flowering stage33.392
SRR8316904Silver flowering stage36.623
SRR8316905Silver flowering stage19.455
SRR8316906Gold flowering stage 39.395
SRR8316907Gold flowering stage 39.485
SRR8316908Gold flowering stage 59.536
SRP132670SRR6706286Control68.781
SRR6706287Light intensity 50%79.002
SRR6706288Light intensity 20%82.811
CNP0000432CNS0095592Slightly white alabastrum(diploid) 132.578
CNS0095593Slightly white alabastrum(diploid) 230.557
CNS0095594Slightly white alabastrum(diploid) 326.286
CNS0095595Whole white alabastrum(diploid) 233.769
CNS0095596Whole white alabastrum(diploid) 339.685
CNS0095597Whole white alabastrum(diploid) 430.315
CNS0095598Silvery flower (diploied) 135.998
CNS0095599Silvery flower (diploied) 235.739
CNS0095600Silvery flower (diploied) 371.594
CNS0095601Golden flower (diploid) 136.106
CNS0095602Golden flower (diploid) 248.036
CNS0095603Golden flower (diploid) 352.008
CNS0095604Slightly white alabastrum(tetraploid) 129.210
CNS0095605Slightly white alabastrum(tetraploid) 229.131
CNS0095606Slightly white alabastrum(tetraploid) 346.652
CNS0095607Whole white alabastrum(tetraploid) 125.737
CNS0095608Whole white alabastrum(tetraploid) 222.529
CNS0095609Whole white alabastrum(tetraploid) 343.324
CNS0095610Silvery flower (tetraploid) 162.390
CNS0095611Silvery flower (tetraploid) 260.073
CNS0095612Silvery flower (tetraploid) 38.843
CNS0095613Golden flower (tetraploid) 132.965
CNS0095614Golden flower (tetraploid) 255.605
CNS0095615Golden flower (tetraploid) 35.204
CRA001975CRR073297Stem 165.819
CRR073298Stem 256.274
CRR073299Stem 343.671
CRR073300Leaf 173.075
CRR073301Leaf 283.197
CRR073302Leaf 382.536
CRR073303Juvenile bud 192.387
CRR073304Juvenile bud 270.230
CRR073305Juvenile bud 375.785
CRR073306Third green 143.023
CRR073307Third green 226.930
CRR073308Third green 332.761
CRR073309Second white 138.958
CRR073310Second white 238.116
CRR073311Second white 330.484
CRR073312Silver flowering 120.122
CRR073313Silver flowering 227.723
CRR073314Silver flowering 320.877
CRR073315Gold flowering 144.635
CRR073316Gold flowering 235.969
CRR073317Gold flowering 335.215
CRR073318Tawny withering 138.688
CRR073319Tawny withering 234.596
CRR073320Tawny withering 346.791