Detail information of GWHGAAZE009702


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG15524.10trigalactosyldiacylglycerol 1, chloroplastic -like protein [Gossypium arboreum]
Swissprottr|Q8L4R0|TGD1_ARATH2E-177Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic (Precursor)
trEMBLtr|A0A061EKY9|A0A061EKY9_THECC0Trigalactosyldiacylglycerol 1 isoform 4 {ECO:0000313|EMBL:EOY05042.1}
TAIR10AT1G19800.31E-129trigalactosyldiacylglycerol 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene115415563115416516+
GWHAAZE00000002mRNA115415563115416516+
GWHAAZE00000002exon115415563115416516+
GWHAAZE00000002CDS115415563115416516+
Transcript Sequence

Network for GWHGAAZE009702

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0204


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02405.17MlaE943026.90E-69
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0043190cellular_componentATP-binding cassette (ABC) transporter complex

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.806
SRR3591706second leaf26.279
SRR3591707mature leaf31.486
SRR3591708Shoot apex38.560
SRR3591709Stem26.534
SRR3591710White floral bud42.289
SRR3591711White flower45.612
SRR3591712Green floral bud65.722
SRR3591713Yellow flower43.473
SRP173429 SRR8316895Juvenile bud stage 37.764
SRR8316896Juvenile bud stage 57.451
SRR8316897Juvenile bud stage 40.541
SRR8316894Third green stage 23.098
SRR8316900Third green stage 64.948
SRR8316901Third green stage 63.602
SRR8316898Complete white stage 21.762
SRR8316899Complete white stage 87.706
SRR8316903Complete white stage 28.215
SRR8316902Silver flowering stage16.214
SRR8316904Silver flowering stage23.278
SRR8316905Silver flowering stage8.942
SRR8316906Gold flowering stage 40.791
SRR8316907Gold flowering stage 35.822
SRR8316908Gold flowering stage 35.508
SRP132670SRR6706286Control37.700
SRR6706287Light intensity 50%44.489
SRR6706288Light intensity 20%50.664
CNP0000432CNS0095592Slightly white alabastrum(diploid) 160.148
CNS0095593Slightly white alabastrum(diploid) 259.624
CNS0095594Slightly white alabastrum(diploid) 356.624
CNS0095595Whole white alabastrum(diploid) 252.403
CNS0095596Whole white alabastrum(diploid) 354.368
CNS0095597Whole white alabastrum(diploid) 446.988
CNS0095598Silvery flower (diploied) 150.157
CNS0095599Silvery flower (diploied) 246.199
CNS0095600Silvery flower (diploied) 341.326
CNS0095601Golden flower (diploid) 150.542
CNS0095602Golden flower (diploid) 245.551
CNS0095603Golden flower (diploid) 344.297
CNS0095604Slightly white alabastrum(tetraploid) 194.277
CNS0095605Slightly white alabastrum(tetraploid) 292.308
CNS0095606Slightly white alabastrum(tetraploid) 3105.773
CNS0095607Whole white alabastrum(tetraploid) 160.756
CNS0095608Whole white alabastrum(tetraploid) 259.875
CNS0095609Whole white alabastrum(tetraploid) 371.859
CNS0095610Silvery flower (tetraploid) 161.242
CNS0095611Silvery flower (tetraploid) 258.632
CNS0095612Silvery flower (tetraploid) 354.452
CNS0095613Golden flower (tetraploid) 141.799
CNS0095614Golden flower (tetraploid) 251.249
CNS0095615Golden flower (tetraploid) 329.693
CRA001975CRR073297Stem 161.014
CRR073298Stem 248.565
CRR073299Stem 339.232
CRR073300Leaf 168.640
CRR073301Leaf 261.192
CRR073302Leaf 339.125
CRR073303Juvenile bud 147.109
CRR073304Juvenile bud 241.996
CRR073305Juvenile bud 340.332
CRR073306Third green 112.419
CRR073307Third green 212.463
CRR073308Third green 310.934
CRR073309Second white 126.624
CRR073310Second white 223.482
CRR073311Second white 317.901
CRR073312Silver flowering 115.369
CRR073313Silver flowering 215.857
CRR073314Silver flowering 39.297
CRR073315Gold flowering 130.572
CRR073316Gold flowering 244.772
CRR073317Gold flowering 328.524
CRR073318Tawny withering 142.283
CRR073319Tawny withering 246.850
CRR073320Tawny withering 342.984