Detail information of GWHGAAZE009730


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011079947.11.2569E-173PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Sesamum indicum]
Swissprottr|O22769|NDUV2_ARATH2E-162NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (Precursor)
trEMBLtr|D7SQJ8|D7SQJ8_VITVI1E-169Putative uncharacterized protein {ECO:0000313|EMBL:CBI17929.3}
TAIR10AT4G02580.12E-128NADH-ubiquinone oxidoreductase 24 kDa subunit, putative

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene116013229116017787-
GWHAAZE00000002mRNA116013229116017787-
GWHAAZE00000002exon116017599116017787-
GWHAAZE00000002exon116017485116017517-
GWHAAZE00000002exon116017297116017362-
GWHAAZE00000002exon116015612116015728-
GWHAAZE00000002exon116015446116015523-
GWHAAZE00000002exon116015223116015328-
GWHAAZE00000002exon116015075116015121-
GWHAAZE00000002exon116013855116013932-
GWHAAZE00000002exon116013701116013766-
GWHAAZE00000002exon116013229116013617-
GWHAAZE00000002five_prime_UTR116017665116017787-
GWHAAZE00000002CDS116017599116017664-
GWHAAZE00000002CDS116017485116017517-
GWHAAZE00000002CDS116017297116017362-
GWHAAZE00000002CDS116015612116015728-
GWHAAZE00000002CDS116015446116015523-
GWHAAZE00000002CDS116015223116015328-
GWHAAZE00000002CDS116015075116015121-
GWHAAZE00000002CDS116013855116013932-
GWHAAZE00000002CDS116013701116013766-
GWHAAZE00000002CDS116013510116013617-
GWHAAZE00000002three_prime_UTR116013229116013509-
Transcript Sequence

Network for GWHGAAZE009730

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01257.202Fe-2S_thioredx562122.20E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03943NDUFV2 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf128.992
SRR3591706second leaf79.810
SRR3591707mature leaf55.088
SRR3591708Shoot apex108.184
SRR3591709Stem106.894
SRR3591710White floral bud115.764
SRR3591711White flower118.118
SRR3591712Green floral bud148.867
SRR3591713Yellow flower101.521
SRP173429 SRR8316895Juvenile bud stage 58.312
SRR8316896Juvenile bud stage 81.722
SRR8316897Juvenile bud stage 47.964
SRR8316894Third green stage 36.048
SRR8316900Third green stage 131.883
SRR8316901Third green stage 124.723
SRR8316898Complete white stage 59.729
SRR8316899Complete white stage 126.606
SRR8316903Complete white stage 72.669
SRR8316902Silver flowering stage61.800
SRR8316904Silver flowering stage85.335
SRR8316905Silver flowering stage40.755
SRR8316906Gold flowering stage 114.699
SRR8316907Gold flowering stage 114.364
SRR8316908Gold flowering stage 128.016
SRP132670SRR6706286Control159.590
SRR6706287Light intensity 50%157.223
SRR6706288Light intensity 20%167.442
CNP0000432CNS0095592Slightly white alabastrum(diploid) 199.555
CNS0095593Slightly white alabastrum(diploid) 2122.537
CNS0095594Slightly white alabastrum(diploid) 3108.142
CNS0095595Whole white alabastrum(diploid) 2118.306
CNS0095596Whole white alabastrum(diploid) 3130.653
CNS0095597Whole white alabastrum(diploid) 4119.628
CNS0095598Silvery flower (diploied) 181.463
CNS0095599Silvery flower (diploied) 290.949
CNS0095600Silvery flower (diploied) 3141.400
CNS0095601Golden flower (diploid) 172.855
CNS0095602Golden flower (diploid) 2101.252
CNS0095603Golden flower (diploid) 3103.901
CNS0095604Slightly white alabastrum(tetraploid) 1152.491
CNS0095605Slightly white alabastrum(tetraploid) 2136.040
CNS0095606Slightly white alabastrum(tetraploid) 3169.207
CNS0095607Whole white alabastrum(tetraploid) 1129.763
CNS0095608Whole white alabastrum(tetraploid) 2144.770
CNS0095609Whole white alabastrum(tetraploid) 3175.663
CNS0095610Silvery flower (tetraploid) 1163.765
CNS0095611Silvery flower (tetraploid) 2164.700
CNS0095612Silvery flower (tetraploid) 3166.683
CNS0095613Golden flower (tetraploid) 1100.065
CNS0095614Golden flower (tetraploid) 2124.498
CNS0095615Golden flower (tetraploid) 382.381
CRA001975CRR073297Stem 190.925
CRR073298Stem 288.398
CRR073299Stem 3116.580
CRR073300Leaf 1124.031
CRR073301Leaf 2133.398
CRR073302Leaf 3170.319
CRR073303Juvenile bud 1182.203
CRR073304Juvenile bud 2177.044
CRR073305Juvenile bud 3168.149
CRR073306Third green 1151.549
CRR073307Third green 2140.347
CRR073308Third green 3123.913
CRR073309Second white 1217.282
CRR073310Second white 2120.154
CRR073311Second white 3104.088
CRR073312Silver flowering 1105.811
CRR073313Silver flowering 2143.267
CRR073314Silver flowering 3110.918
CRR073315Gold flowering 181.975
CRR073316Gold flowering 290.045
CRR073317Gold flowering 390.218
CRR073318Tawny withering 195.313
CRR073319Tawny withering 2103.289
CRR073320Tawny withering 3103.408