Detail information of GWHGAAZE009878


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002263353.10PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Vitis vinifera]
Swissprottr|O82243|GH39_ARATH0Putative indole-3-acetic acid-amido synthetase GH3.9
trEMBLtr|F6HZ30|F6HZ30_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB59945.1}
TAIR10AT2G47750.10putative indole-3-acetic acid-amido synthetase GH3.9

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene119025186119028261-
GWHAAZE00000002mRNA119025186119028261-
GWHAAZE00000002exon119027972119028261-
GWHAAZE00000002exon119027729119027830-
GWHAAZE00000002exon119026088119026911-
GWHAAZE00000002exon119025186119025934-
GWHAAZE00000002CDS119027972119028261-
GWHAAZE00000002CDS119027729119027830-
GWHAAZE00000002CDS119026088119026911-
GWHAAZE00000002CDS119025369119025934-
GWHAAZE00000002three_prime_UTR119025186119025368-
Transcript Sequence

Network for GWHGAAZE009878

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03321.14GH3175685.00E-192
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14487GH3 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.568
SRR3591706second leaf0.283
SRR3591707mature leaf0.048
SRR3591708Shoot apex2.863
SRR3591709Stem3.711
SRR3591710White floral bud11.972
SRR3591711White flower4.635
SRR3591712Green floral bud5.098
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 3.461
SRR8316896Juvenile bud stage 2.594
SRR8316897Juvenile bud stage 4.919
SRR8316894Third green stage 1.492
SRR8316900Third green stage 3.539
SRR8316901Third green stage 4.226
SRR8316898Complete white stage 6.988
SRR8316899Complete white stage 5.351
SRR8316903Complete white stage 15.405
SRR8316902Silver flowering stage0.907
SRR8316904Silver flowering stage1.453
SRR8316905Silver flowering stage0.445
SRR8316906Gold flowering stage 0.028
SRR8316907Gold flowering stage 0.157
SRR8316908Gold flowering stage 0.152
SRP132670SRR6706286Control9.681
SRR6706287Light intensity 50%4.735
SRR6706288Light intensity 20%3.553
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.334
CNS0095593Slightly white alabastrum(diploid) 24.201
CNS0095594Slightly white alabastrum(diploid) 32.628
CNS0095595Whole white alabastrum(diploid) 21.833
CNS0095596Whole white alabastrum(diploid) 31.046
CNS0095597Whole white alabastrum(diploid) 43.129
CNS0095598Silvery flower (diploied) 16.463
CNS0095599Silvery flower (diploied) 23.123
CNS0095600Silvery flower (diploied) 32.125
CNS0095601Golden flower (diploid) 12.057
CNS0095602Golden flower (diploid) 22.304
CNS0095603Golden flower (diploid) 32.513
CNS0095604Slightly white alabastrum(tetraploid) 15.387
CNS0095605Slightly white alabastrum(tetraploid) 25.984
CNS0095606Slightly white alabastrum(tetraploid) 37.405
CNS0095607Whole white alabastrum(tetraploid) 111.464
CNS0095608Whole white alabastrum(tetraploid) 21.958
CNS0095609Whole white alabastrum(tetraploid) 36.577
CNS0095610Silvery flower (tetraploid) 14.589
CNS0095611Silvery flower (tetraploid) 26.732
CNS0095612Silvery flower (tetraploid) 30.893
CNS0095613Golden flower (tetraploid) 10.311
CNS0095614Golden flower (tetraploid) 20.185
CNS0095615Golden flower (tetraploid) 30.078
CRA001975CRR073297Stem 111.594
CRR073298Stem 29.795
CRR073299Stem 316.804
CRR073300Leaf 12.155
CRR073301Leaf 23.142
CRR073302Leaf 35.308
CRR073303Juvenile bud 10.981
CRR073304Juvenile bud 22.470
CRR073305Juvenile bud 34.085
CRR073306Third green 10.152
CRR073307Third green 20.146
CRR073308Third green 30.286
CRR073309Second white 10.024
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.155
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.023
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.031
CRR073317Gold flowering 30.277
CRR073318Tawny withering 16.114
CRR073319Tawny withering 219.695
CRR073320Tawny withering 35.371