Detail information of GWHGAAZE009901


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009613832.10PREDICTED: caffeoylshikimate esterase isoform X1 [Nicotiana tomentosiformis]
Swissprottr|Q9C942|CSE_ARATH8E-63Caffeoylshikimate esterase
trEMBLtr|M1D4N0|M1D4N0_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400081375}
TAIR10AT3G62860.17E-144alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene119478697119483944-
GWHAAZE00000002mRNA119478697119483944-
GWHAAZE00000002exon119483824119483944-
GWHAAZE00000002exon119483584119483674-
GWHAAZE00000002exon119483323119483355-
GWHAAZE00000002exon119481137119481283-
GWHAAZE00000002exon119479736119479866-
GWHAAZE00000002exon119479450119479587-
GWHAAZE00000002exon119479245119479343-
GWHAAZE00000002exon119478697119479092-
GWHAAZE00000002five_prime_UTR119483845119483944-
GWHAAZE00000002CDS119483824119483844-
GWHAAZE00000002CDS119483584119483674-
GWHAAZE00000002CDS119483323119483355-
GWHAAZE00000002CDS119481137119481283-
GWHAAZE00000002CDS119479736119479866-
GWHAAZE00000002CDS119479450119479587-
GWHAAZE00000002CDS119479245119479343-
GWHAAZE00000002CDS119478697119479092-
Transcript Sequence

Network for GWHGAAZE009901

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12146.9Hydrolase_4282691.90E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01054MGLL Metabolic pathways map01100
Glycerolipid metabolismmap00561
Regulation of lipolysis in adipocytesmap04923
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.092
SRR3591706second leaf5.131
SRR3591707mature leaf1.212
SRR3591708Shoot apex50.893
SRR3591709Stem31.270
SRR3591710White floral bud11.657
SRR3591711White flower12.715
SRR3591712Green floral bud16.755
SRR3591713Yellow flower8.675
SRP173429 SRR8316895Juvenile bud stage 12.629
SRR8316896Juvenile bud stage 21.230
SRR8316897Juvenile bud stage 12.166
SRR8316894Third green stage 6.175
SRR8316900Third green stage 14.725
SRR8316901Third green stage 13.652
SRR8316898Complete white stage 2.864
SRR8316899Complete white stage 25.176
SRR8316903Complete white stage 3.176
SRR8316902Silver flowering stage1.099
SRR8316904Silver flowering stage0.879
SRR8316905Silver flowering stage0.644
SRR8316906Gold flowering stage 2.479
SRR8316907Gold flowering stage 2.604
SRR8316908Gold flowering stage 4.095
SRP132670SRR6706286Control15.037
SRR6706287Light intensity 50%14.071
SRR6706288Light intensity 20%13.061
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.615
CNS0095593Slightly white alabastrum(diploid) 214.391
CNS0095594Slightly white alabastrum(diploid) 311.918
CNS0095595Whole white alabastrum(diploid) 28.505
CNS0095596Whole white alabastrum(diploid) 32.226
CNS0095597Whole white alabastrum(diploid) 43.850
CNS0095598Silvery flower (diploied) 113.791
CNS0095599Silvery flower (diploied) 212.210
CNS0095600Silvery flower (diploied) 33.746
CNS0095601Golden flower (diploid) 111.171
CNS0095602Golden flower (diploid) 26.624
CNS0095603Golden flower (diploid) 37.159
CNS0095604Slightly white alabastrum(tetraploid) 17.208
CNS0095605Slightly white alabastrum(tetraploid) 25.543
CNS0095606Slightly white alabastrum(tetraploid) 314.688
CNS0095607Whole white alabastrum(tetraploid) 15.540
CNS0095608Whole white alabastrum(tetraploid) 24.332
CNS0095609Whole white alabastrum(tetraploid) 315.446
CNS0095610Silvery flower (tetraploid) 18.695
CNS0095611Silvery flower (tetraploid) 26.756
CNS0095612Silvery flower (tetraploid) 36.000
CNS0095613Golden flower (tetraploid) 15.438
CNS0095614Golden flower (tetraploid) 26.477
CNS0095615Golden flower (tetraploid) 31.707
CRA001975CRR073297Stem 119.540
CRR073298Stem 217.875
CRR073299Stem 317.192
CRR073300Leaf 119.275
CRR073301Leaf 231.197
CRR073302Leaf 317.666
CRR073303Juvenile bud 113.063
CRR073304Juvenile bud 27.851
CRR073305Juvenile bud 326.208
CRR073306Third green 11.907
CRR073307Third green 21.616
CRR073308Third green 34.122
CRR073309Second white 10.713
CRR073310Second white 21.960
CRR073311Second white 31.170
CRR073312Silver flowering 10.515
CRR073313Silver flowering 21.421
CRR073314Silver flowering 31.116
CRR073315Gold flowering 10.952
CRR073316Gold flowering 22.151
CRR073317Gold flowering 31.326
CRR073318Tawny withering 154.169
CRR073319Tawny withering 252.916
CRR073320Tawny withering 341.804