Detail information of GWHGAAZE009924


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrABY28263.10ethylene receptor ERS1b [Actinidia deliciosa]
Swissprottr|Q9M7M1|ETR1_PRUPE0Ethylene receptor
trEMBLtr|B3FIA8|B3FIA8_ACTDE0Ethylene receptor ERS1b {ECO:0000313|EMBL:ABY28263.1}
TAIR10AT2G40940.10ethylene response sensor 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene119908561119912861-
GWHAAZE00000002mRNA119908561119912861-
GWHAAZE00000002exon119908561119909111-
GWHAAZE00000002exon119909220119909347-
GWHAAZE00000002exon119910182119910451-
GWHAAZE00000002exon119910554119910922-
GWHAAZE00000002exon119911623119912538-
GWHAAZE00000002exon119912698119912861-
GWHAAZE00000002CDS119912698119912861-
GWHAAZE00000002CDS119911623119912538-
GWHAAZE00000002CDS119910554119910922-
GWHAAZE00000002CDS119910182119910451-
GWHAAZE00000002CDS119909220119909347-
GWHAAZE00000002CDS119908862119909111-
GWHAAZE00000002three_prime_UTR119908561119908861-
Transcript Sequence

Network for GWHGAAZE009924

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0037


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01590.27GAF2163653.60E-15
PF00512.26HisKA4024662.70E-14
PF02518.27HATPase_c5136441.70E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14509ETR, ERS MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0007165biological_processsignal transduction
GO:0009723biological_processresponse to ethylene
GO:0016310biological_processphosphorylation
GO:0005789cellular_componentendoplasmic reticulum membrane
GO:0000155molecular_functionphosphorelay sensor kinase activity
GO:0005515molecular_functionprotein binding
GO:0004672molecular_functionprotein kinase activity
GO:0038199molecular_functionethylene receptor activity
GO:0051740molecular_functionethylene binding
GO:0016772molecular_functiontransferase activity, transferring phosphorus-containing groups

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE009924.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 3050100150200250300350400450500550Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf407.438
SRR3591706second leaf171.229
SRR3591707mature leaf357.583
SRR3591708Shoot apex197.097
SRR3591709Stem490.196
SRR3591710White floral bud121.769
SRR3591711White flower478.178
SRR3591712Green floral bud86.955
SRR3591713Yellow flower281.030
SRP173429 SRR8316895Juvenile bud stage 58.291
SRR8316896Juvenile bud stage 79.034
SRR8316897Juvenile bud stage 43.580
SRR8316894Third green stage 43.848
SRR8316900Third green stage 79.850
SRR8316901Third green stage 83.160
SRR8316898Complete white stage 28.580
SRR8316899Complete white stage 163.643
SRR8316903Complete white stage 50.528
SRR8316902Silver flowering stage73.424
SRR8316904Silver flowering stage101.145
SRR8316905Silver flowering stage52.102
SRR8316906Gold flowering stage 181.712
SRR8316907Gold flowering stage 139.587
SRR8316908Gold flowering stage 232.375
SRP132670SRR6706286Control60.214
SRR6706287Light intensity 50%54.633
SRR6706288Light intensity 20%57.755
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1109.059
CNS0095593Slightly white alabastrum(diploid) 259.394
CNS0095594Slightly white alabastrum(diploid) 347.324
CNS0095595Whole white alabastrum(diploid) 250.674
CNS0095596Whole white alabastrum(diploid) 340.093
CNS0095597Whole white alabastrum(diploid) 447.500
CNS0095598Silvery flower (diploied) 1135.438
CNS0095599Silvery flower (diploied) 2136.070
CNS0095600Silvery flower (diploied) 3250.771
CNS0095601Golden flower (diploid) 1127.861
CNS0095602Golden flower (diploid) 2217.701
CNS0095603Golden flower (diploid) 3211.594
CNS0095604Slightly white alabastrum(tetraploid) 157.101
CNS0095605Slightly white alabastrum(tetraploid) 252.382
CNS0095606Slightly white alabastrum(tetraploid) 3104.005
CNS0095607Whole white alabastrum(tetraploid) 148.386
CNS0095608Whole white alabastrum(tetraploid) 228.038
CNS0095609Whole white alabastrum(tetraploid) 351.028
CNS0095610Silvery flower (tetraploid) 1211.327
CNS0095611Silvery flower (tetraploid) 2197.054
CNS0095612Silvery flower (tetraploid) 3113.492
CNS0095613Golden flower (tetraploid) 195.920
CNS0095614Golden flower (tetraploid) 2182.874
CNS0095615Golden flower (tetraploid) 3157.223
CRA001975CRR073297Stem 164.177
CRR073298Stem 255.124
CRR073299Stem 339.330
CRR073300Leaf 166.660
CRR073301Leaf 256.132
CRR073302Leaf 343.488
CRR073303Juvenile bud 157.891
CRR073304Juvenile bud 251.853
CRR073305Juvenile bud 367.362
CRR073306Third green 114.871
CRR073307Third green 214.936
CRR073308Third green 318.760
CRR073309Second white 140.300
CRR073310Second white 233.865
CRR073311Second white 328.975
CRR073312Silver flowering 122.380
CRR073313Silver flowering 221.157
CRR073314Silver flowering 331.917
CRR073315Gold flowering 130.341
CRR073316Gold flowering 243.584
CRR073317Gold flowering 331.866
CRR073318Tawny withering 194.061
CRR073319Tawny withering 295.086
CRR073320Tawny withering 3105.417