Detail information of GWHGAAZE010089


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002534598.19.79517E-65ATP synthase subunit, putative [Ricinus communis]
Swissprottr|P05499|ATP6_TOBAC7E-44ATP synthase subunit a
trEMBLtr|W5GU73|W5GU73_WHEAT8E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_6DL_0FE2EF8A9.1} (Fragment)
TAIR10ATMG00410.12E-23ATPase subunit 6-1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene123274939123275685-
GWHAAZE00000002mRNA123274939123275685-
GWHAAZE00000002exon123275412123275685-
GWHAAZE00000002exon123274939123275093-
GWHAAZE00000002CDS123275412123275685-
GWHAAZE00000002CDS123274939123275093-
Transcript Sequence

Network for GWHGAAZE010089

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02126ATPeF0A, MTATP6, ATP6 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.034
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.494
SRR3591709Stem0.161
SRR3591710White floral bud0.505
SRR3591711White flower0.176
SRR3591712Green floral bud0.147
SRR3591713Yellow flower0.280
SRP173429 SRR8316895Juvenile bud stage 12.598
SRR8316896Juvenile bud stage 5.577
SRR8316897Juvenile bud stage 19.912
SRR8316894Third green stage 20.626
SRR8316900Third green stage 1.631
SRR8316901Third green stage 1.462
SRR8316898Complete white stage 12.190
SRR8316899Complete white stage 0.613
SRR8316903Complete white stage 13.607
SRR8316902Silver flowering stage15.584
SRR8316904Silver flowering stage20.985
SRR8316905Silver flowering stage13.769
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.075
SRP132670SRR6706286Control0.345
SRR6706287Light intensity 50%0.430
SRR6706288Light intensity 20%0.279
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.731
CNS0095593Slightly white alabastrum(diploid) 25.165
CNS0095594Slightly white alabastrum(diploid) 36.445
CNS0095595Whole white alabastrum(diploid) 210.324
CNS0095596Whole white alabastrum(diploid) 36.905
CNS0095597Whole white alabastrum(diploid) 413.158
CNS0095598Silvery flower (diploied) 18.455
CNS0095599Silvery flower (diploied) 211.125
CNS0095600Silvery flower (diploied) 32.751
CNS0095601Golden flower (diploid) 18.766
CNS0095602Golden flower (diploid) 20.734
CNS0095603Golden flower (diploid) 32.762
CNS0095604Slightly white alabastrum(tetraploid) 14.634
CNS0095605Slightly white alabastrum(tetraploid) 24.636
CNS0095606Slightly white alabastrum(tetraploid) 31.537
CNS0095607Whole white alabastrum(tetraploid) 111.076
CNS0095608Whole white alabastrum(tetraploid) 28.775
CNS0095609Whole white alabastrum(tetraploid) 32.678
CNS0095610Silvery flower (tetraploid) 11.174
CNS0095611Silvery flower (tetraploid) 22.474
CNS0095612Silvery flower (tetraploid) 31.308
CNS0095613Golden flower (tetraploid) 19.140
CNS0095614Golden flower (tetraploid) 22.668
CNS0095615Golden flower (tetraploid) 31.049
CRA001975CRR073297Stem 10.708
CRR073298Stem 20.967
CRR073299Stem 30.016
CRR073300Leaf 10.196
CRR073301Leaf 20.720
CRR073302Leaf 30.041
CRR073303Juvenile bud 10.808
CRR073304Juvenile bud 20.143
CRR073305Juvenile bud 32.033
CRR073306Third green 10.305
CRR073307Third green 20.147
CRR073308Third green 31.240
CRR073309Second white 10.413
CRR073310Second white 22.346
CRR073311Second white 38.487
CRR073312Silver flowering 18.376
CRR073313Silver flowering 24.279
CRR073314Silver flowering 32.732
CRR073315Gold flowering 10.488
CRR073316Gold flowering 20.391
CRR073317Gold flowering 30.676
CRR073318Tawny withering 11.713
CRR073319Tawny withering 20.947
CRR073320Tawny withering 30.367