Detail information of GWHGAAZE010196


Functional Annotation

DatabaseOrthologsE valueAnnotation
Nr1211235DE5.0915E-178NADH dehydrogenase 2-like ORF 260
Swissprottr|P0CD25|NU2C2_PANGI5E-176NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00445}
trEMBLtr|H6T8L4|H6T8L4_9CARY1E-177NADH dehydrogenase subunit 2 {ECO:0000313|EMBL:AFB74221.1} (Fragment)
TAIR10ATCG01250.18E-101NADH-Ubiquinone/plastoquinone (complex I) protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene123994848123995609+
GWHAAZE00000002mRNA123994848123995609+
GWHAAZE00000002exon123994848123995609+
GWHAAZE00000002CDS123994848123995609+
Transcript Sequence

Network for GWHGAAZE010196

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00361.21Proton_antipo_M21855.00E-53
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05573ndhB Metabolic pathways map01100
Oxidative phosphorylationmap00190

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.063
SRR3591706second leaf1.959
SRR3591707mature leaf1.891
SRR3591708Shoot apex1.579
SRR3591709Stem0.360
SRR3591710White floral bud0.379
SRR3591711White flower0.324
SRR3591712Green floral bud0.170
SRR3591713Yellow flower0.085
SRP173429 SRR8316895Juvenile bud stage 5.289
SRR8316896Juvenile bud stage 2.895
SRR8316897Juvenile bud stage 9.098
SRR8316894Third green stage 8.553
SRR8316900Third green stage 1.850
SRR8316901Third green stage 0.896
SRR8316898Complete white stage 2.248
SRR8316899Complete white stage 0.471
SRR8316903Complete white stage 2.965
SRR8316902Silver flowering stage3.224
SRR8316904Silver flowering stage4.065
SRR8316905Silver flowering stage2.949
SRR8316906Gold flowering stage 0.898
SRR8316907Gold flowering stage 0.697
SRR8316908Gold flowering stage 0.715
SRP132670SRR6706286Control0.362
SRR6706287Light intensity 50%0.014
SRR6706288Light intensity 20%0.043
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.358
CNS0095593Slightly white alabastrum(diploid) 22.089
CNS0095594Slightly white alabastrum(diploid) 33.895
CNS0095595Whole white alabastrum(diploid) 24.997
CNS0095596Whole white alabastrum(diploid) 31.652
CNS0095597Whole white alabastrum(diploid) 44.147
CNS0095598Silvery flower (diploied) 13.097
CNS0095599Silvery flower (diploied) 22.510
CNS0095600Silvery flower (diploied) 34.638
CNS0095601Golden flower (diploid) 13.903
CNS0095602Golden flower (diploid) 25.031
CNS0095603Golden flower (diploid) 35.089
CNS0095604Slightly white alabastrum(tetraploid) 13.330
CNS0095605Slightly white alabastrum(tetraploid) 23.211
CNS0095606Slightly white alabastrum(tetraploid) 35.166
CNS0095607Whole white alabastrum(tetraploid) 12.451
CNS0095608Whole white alabastrum(tetraploid) 22.849
CNS0095609Whole white alabastrum(tetraploid) 35.946
CNS0095610Silvery flower (tetraploid) 13.764
CNS0095611Silvery flower (tetraploid) 27.864
CNS0095612Silvery flower (tetraploid) 34.877
CNS0095613Golden flower (tetraploid) 12.509
CNS0095614Golden flower (tetraploid) 22.859
CNS0095615Golden flower (tetraploid) 34.421
CRA001975CRR073297Stem 18.478
CRR073298Stem 211.412
CRR073299Stem 34.551
CRR073300Leaf 16.910
CRR073301Leaf 26.200
CRR073302Leaf 31.494
CRR073303Juvenile bud 11.989
CRR073304Juvenile bud 22.319
CRR073305Juvenile bud 33.049
CRR073306Third green 13.206
CRR073307Third green 21.327
CRR073308Third green 33.134
CRR073309Second white 14.232
CRR073310Second white 28.545
CRR073311Second white 39.879
CRR073312Silver flowering 14.880
CRR073313Silver flowering 22.902
CRR073314Silver flowering 33.296
CRR073315Gold flowering 131.645
CRR073316Gold flowering 280.908
CRR073317Gold flowering 340.119
CRR073318Tawny withering 15.791
CRR073319Tawny withering 24.224
CRR073320Tawny withering 34.232