Detail information of GWHGAAZE010215


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene124064172124065104+
GWHAAZE00000002mRNA124064172124065104+
GWHAAZE00000002exon124064172124065104+
GWHAAZE00000002CDS124064172124065104+
Transcript Sequence

Network for GWHGAAZE010215

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0052


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.752
SRR3591706second leaf0.371
SRR3591707mature leaf0.152
SRR3591708Shoot apex0.956
SRR3591709Stem0.129
SRR3591710White floral bud0.719
SRR3591711White flower0.880
SRR3591712Green floral bud1.634
SRR3591713Yellow flower1.429
SRP173429 SRR8316895Juvenile bud stage 7.579
SRR8316896Juvenile bud stage 7.848
SRR8316897Juvenile bud stage 16.913
SRR8316894Third green stage 14.259
SRR8316900Third green stage 8.330
SRR8316901Third green stage 3.993
SRR8316898Complete white stage 4.276
SRR8316899Complete white stage 1.955
SRR8316903Complete white stage 3.999
SRR8316902Silver flowering stage7.387
SRR8316904Silver flowering stage6.807
SRR8316905Silver flowering stage9.426
SRR8316906Gold flowering stage 3.106
SRR8316907Gold flowering stage 3.250
SRR8316908Gold flowering stage 2.690
SRP132670SRR6706286Control2.476
SRR6706287Light intensity 50%3.591
SRR6706288Light intensity 20%3.299
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.399
CNS0095593Slightly white alabastrum(diploid) 29.875
CNS0095594Slightly white alabastrum(diploid) 311.825
CNS0095595Whole white alabastrum(diploid) 219.216
CNS0095596Whole white alabastrum(diploid) 317.264
CNS0095597Whole white alabastrum(diploid) 422.909
CNS0095598Silvery flower (diploied) 18.262
CNS0095599Silvery flower (diploied) 29.624
CNS0095600Silvery flower (diploied) 316.775
CNS0095601Golden flower (diploid) 113.098
CNS0095602Golden flower (diploid) 213.051
CNS0095603Golden flower (diploid) 314.839
CNS0095604Slightly white alabastrum(tetraploid) 123.324
CNS0095605Slightly white alabastrum(tetraploid) 218.478
CNS0095606Slightly white alabastrum(tetraploid) 321.669
CNS0095607Whole white alabastrum(tetraploid) 117.373
CNS0095608Whole white alabastrum(tetraploid) 216.901
CNS0095609Whole white alabastrum(tetraploid) 333.710
CNS0095610Silvery flower (tetraploid) 121.729
CNS0095611Silvery flower (tetraploid) 240.169
CNS0095612Silvery flower (tetraploid) 320.793
CNS0095613Golden flower (tetraploid) 122.246
CNS0095614Golden flower (tetraploid) 216.651
CNS0095615Golden flower (tetraploid) 319.517
CRA001975CRR073297Stem 126.197
CRR073298Stem 235.906
CRR073299Stem 311.073
CRR073300Leaf 132.390
CRR073301Leaf 231.576
CRR073302Leaf 314.745
CRR073303Juvenile bud 137.076
CRR073304Juvenile bud 223.958
CRR073305Juvenile bud 328.229
CRR073306Third green 127.263
CRR073307Third green 214.847
CRR073308Third green 330.519
CRR073309Second white 127.250
CRR073310Second white 246.597
CRR073311Second white 368.162
CRR073312Silver flowering 142.752
CRR073313Silver flowering 214.328
CRR073314Silver flowering 323.370
CRR073315Gold flowering 114.718
CRR073316Gold flowering 213.041
CRR073317Gold flowering 37.870
CRR073318Tawny withering 113.296
CRR073319Tawny withering 29.523
CRR073320Tawny withering 311.587