Detail information of GWHGAAZE010225


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008372815.11.05074E-57PREDICTED: uncharacterized protein LOC103436170 [Malus domestica]

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene285148288827-
GWHAAZE00000003mRNA285148288827-
GWHAAZE00000003exon285148285655-
GWHAAZE00000003exon285758285829-
GWHAAZE00000003exon287627287842-
GWHAAZE00000003exon288388288500-
GWHAAZE00000003exon288593288827-
GWHAAZE00000003CDS288593288827-
GWHAAZE00000003CDS288388288500-
GWHAAZE00000003CDS287627287842-
GWHAAZE00000003CDS285758285829-
GWHAAZE00000003CDS285545285655-
GWHAAZE00000003three_prime_UTR285148285544-
Transcript Sequence

Network for GWHGAAZE010225

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0066


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.056
SRR3591711White flower0.015
SRR3591712Green floral bud0.029
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.136
SRR8316896Juvenile bud stage 1.434
SRR8316897Juvenile bud stage 0.833
SRR8316894Third green stage 0.879
SRR8316900Third green stage 1.730
SRR8316901Third green stage 1.682
SRR8316898Complete white stage 1.463
SRR8316899Complete white stage 1.473
SRR8316903Complete white stage 1.849
SRR8316902Silver flowering stage0.627
SRR8316904Silver flowering stage0.559
SRR8316905Silver flowering stage0.341
SRR8316906Gold flowering stage 0.835
SRR8316907Gold flowering stage 1.219
SRR8316908Gold flowering stage 1.063
SRP132670SRR6706286Control1.600
SRR6706287Light intensity 50%2.131
SRR6706288Light intensity 20%1.404
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.091
CNS0095593Slightly white alabastrum(diploid) 21.036
CNS0095594Slightly white alabastrum(diploid) 31.856
CNS0095595Whole white alabastrum(diploid) 21.456
CNS0095596Whole white alabastrum(diploid) 31.955
CNS0095597Whole white alabastrum(diploid) 41.538
CNS0095598Silvery flower (diploied) 11.251
CNS0095599Silvery flower (diploied) 21.155
CNS0095600Silvery flower (diploied) 31.212
CNS0095601Golden flower (diploid) 12.153
CNS0095602Golden flower (diploid) 20.873
CNS0095603Golden flower (diploid) 30.834
CNS0095604Slightly white alabastrum(tetraploid) 10.091
CNS0095605Slightly white alabastrum(tetraploid) 20.048
CNS0095606Slightly white alabastrum(tetraploid) 30.061
CNS0095607Whole white alabastrum(tetraploid) 10.061
CNS0095608Whole white alabastrum(tetraploid) 20.139
CNS0095609Whole white alabastrum(tetraploid) 30.026
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.009
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.073
CNS0095614Golden flower (tetraploid) 20.015
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.683
CRR073298Stem 21.303
CRR073299Stem 30.295
CRR073300Leaf 11.120
CRR073301Leaf 21.938
CRR073302Leaf 30.304
CRR073303Juvenile bud 10.459
CRR073304Juvenile bud 20.113
CRR073305Juvenile bud 30.163
CRR073306Third green 10.351
CRR073307Third green 20.312
CRR073308Third green 30.163
CRR073309Second white 10.008
CRR073310Second white 20.734
CRR073311Second white 30.177
CRR073312Silver flowering 10.268
CRR073313Silver flowering 20.138
CRR073314Silver flowering 30.228
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.050
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.281
CRR073319Tawny withering 20.012
CRR073320Tawny withering 30.000