Detail information of GWHGAAZE010255


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007209322.10hypothetical protein PRUPE_ppa007997mg [Prunus persica]
Swissprottr|P93471|COP1_PEA5E-12E3 ubiquitin-protein ligase COP1
trEMBLtr|M5WB39|M5WB39_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ10521.1}
TAIR10AT5G63010.12E-120Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene19734821974895+
GWHAAZE00000003mRNA19734821974895+
GWHAAZE00000003exon19734821973812+
GWHAAZE00000003exon19741771974895+
GWHAAZE00000003CDS19734821973812+
GWHAAZE00000003CDS19741771974895+
Transcript Sequence

Network for GWHGAAZE010255

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD401601970.0061
PF00400.33WD402112430.0058
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.505
SRR3591706second leaf7.717
SRR3591707mature leaf7.839
SRR3591708Shoot apex16.346
SRR3591709Stem12.236
SRR3591710White floral bud10.627
SRR3591711White flower9.330
SRR3591712Green floral bud12.847
SRR3591713Yellow flower7.593
SRP173429 SRR8316895Juvenile bud stage 5.801
SRR8316896Juvenile bud stage 6.501
SRR8316897Juvenile bud stage 2.353
SRR8316894Third green stage 4.745
SRR8316900Third green stage 14.266
SRR8316901Third green stage 9.510
SRR8316898Complete white stage 4.509
SRR8316899Complete white stage 14.287
SRR8316903Complete white stage 5.882
SRR8316902Silver flowering stage3.310
SRR8316904Silver flowering stage5.849
SRR8316905Silver flowering stage1.674
SRR8316906Gold flowering stage 8.858
SRR8316907Gold flowering stage 7.515
SRR8316908Gold flowering stage 8.618
SRP132670SRR6706286Control6.547
SRR6706287Light intensity 50%6.158
SRR6706288Light intensity 20%7.131
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.486
CNS0095593Slightly white alabastrum(diploid) 26.167
CNS0095594Slightly white alabastrum(diploid) 35.839
CNS0095595Whole white alabastrum(diploid) 25.470
CNS0095596Whole white alabastrum(diploid) 35.730
CNS0095597Whole white alabastrum(diploid) 45.166
CNS0095598Silvery flower (diploied) 19.267
CNS0095599Silvery flower (diploied) 25.941
CNS0095600Silvery flower (diploied) 39.895
CNS0095601Golden flower (diploid) 19.358
CNS0095602Golden flower (diploid) 211.857
CNS0095603Golden flower (diploid) 310.147
CNS0095604Slightly white alabastrum(tetraploid) 113.993
CNS0095605Slightly white alabastrum(tetraploid) 29.241
CNS0095606Slightly white alabastrum(tetraploid) 320.836
CNS0095607Whole white alabastrum(tetraploid) 16.320
CNS0095608Whole white alabastrum(tetraploid) 25.396
CNS0095609Whole white alabastrum(tetraploid) 310.181
CNS0095610Silvery flower (tetraploid) 19.994
CNS0095611Silvery flower (tetraploid) 210.720
CNS0095612Silvery flower (tetraploid) 39.526
CNS0095613Golden flower (tetraploid) 17.698
CNS0095614Golden flower (tetraploid) 211.077
CNS0095615Golden flower (tetraploid) 37.297
CRA001975CRR073297Stem 17.948
CRR073298Stem 27.671
CRR073299Stem 37.042
CRR073300Leaf 17.500
CRR073301Leaf 25.922
CRR073302Leaf 35.303
CRR073303Juvenile bud 14.721
CRR073304Juvenile bud 25.129
CRR073305Juvenile bud 36.301
CRR073306Third green 11.807
CRR073307Third green 21.906
CRR073308Third green 31.458
CRR073309Second white 15.304
CRR073310Second white 24.563
CRR073311Second white 33.060
CRR073312Silver flowering 12.433
CRR073313Silver flowering 24.060
CRR073314Silver flowering 33.320
CRR073315Gold flowering 14.786
CRR073316Gold flowering 25.025
CRR073317Gold flowering 36.530
CRR073318Tawny withering 110.348
CRR073319Tawny withering 212.468
CRR073320Tawny withering 310.945