Detail information of GWHGAAZE010322


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACU17655.12.91982E-64unknown [Glycine max]
Swissprottr|O24495|GLO2M_ARATH5E-62Hydroxyacylglutathione hydrolase 1, mitochondrial (Precursor)
trEMBLtr|C6T753|C6T753_SOYBN1E-64Putative uncharacterized protein {ECO:0000313|EMBL:ACU17655.1} (Fragment)
TAIR10AT2G43430.13E-47glyoxalase 2-1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene34746043476219-
GWHAAZE00000003mRNA34746043476219-
GWHAAZE00000003exon34746043474630-
GWHAAZE00000003exon34749083475111-
GWHAAZE00000003exon34754763475658-
GWHAAZE00000003exon34757683476219-
GWHAAZE00000003five_prime_UTR34757683476219-
GWHAAZE00000003five_prime_UTR34756293475658-
GWHAAZE00000003CDS34754763475628-
GWHAAZE00000003CDS34749083475111-
GWHAAZE00000003CDS34746043474630-
Transcript Sequence

Network for GWHGAAZE010322

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00753.28Lactamase_B601209.30E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01069gloB, gloC, HAGH Metabolic pathways map01100
Pyruvate metabolismmap00620

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf28.450
SRR3591706second leaf14.272
SRR3591707mature leaf14.773
SRR3591708Shoot apex16.446
SRR3591709Stem24.544
SRR3591710White floral bud17.200
SRR3591711White flower16.452
SRR3591712Green floral bud21.365
SRR3591713Yellow flower15.602
SRP173429 SRR8316895Juvenile bud stage 12.879
SRR8316896Juvenile bud stage 18.262
SRR8316897Juvenile bud stage 11.829
SRR8316894Third green stage 8.587
SRR8316900Third green stage 22.248
SRR8316901Third green stage 24.849
SRR8316898Complete white stage 9.553
SRR8316899Complete white stage 36.403
SRR8316903Complete white stage 15.469
SRR8316902Silver flowering stage8.950
SRR8316904Silver flowering stage12.599
SRR8316905Silver flowering stage4.391
SRR8316906Gold flowering stage 15.785
SRR8316907Gold flowering stage 12.847
SRR8316908Gold flowering stage 16.456
SRP132670SRR6706286Control19.356
SRR6706287Light intensity 50%20.225
SRR6706288Light intensity 20%23.627
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.605
CNS0095593Slightly white alabastrum(diploid) 218.059
CNS0095594Slightly white alabastrum(diploid) 318.451
CNS0095595Whole white alabastrum(diploid) 215.837
CNS0095596Whole white alabastrum(diploid) 312.188
CNS0095597Whole white alabastrum(diploid) 414.114
CNS0095598Silvery flower (diploied) 116.060
CNS0095599Silvery flower (diploied) 210.602
CNS0095600Silvery flower (diploied) 317.470
CNS0095601Golden flower (diploid) 112.692
CNS0095602Golden flower (diploid) 221.001
CNS0095603Golden flower (diploid) 316.478
CNS0095604Slightly white alabastrum(tetraploid) 130.095
CNS0095605Slightly white alabastrum(tetraploid) 223.134
CNS0095606Slightly white alabastrum(tetraploid) 340.356
CNS0095607Whole white alabastrum(tetraploid) 119.426
CNS0095608Whole white alabastrum(tetraploid) 219.327
CNS0095609Whole white alabastrum(tetraploid) 332.477
CNS0095610Silvery flower (tetraploid) 124.020
CNS0095611Silvery flower (tetraploid) 222.517
CNS0095612Silvery flower (tetraploid) 317.932
CNS0095613Golden flower (tetraploid) 111.815
CNS0095614Golden flower (tetraploid) 218.441
CNS0095615Golden flower (tetraploid) 311.562
CRA001975CRR073297Stem 19.842
CRR073298Stem 26.705
CRR073299Stem 34.361
CRR073300Leaf 17.937
CRR073301Leaf 28.171
CRR073302Leaf 36.593
CRR073303Juvenile bud 14.635
CRR073304Juvenile bud 25.262
CRR073305Juvenile bud 36.564
CRR073306Third green 12.075
CRR073307Third green 22.867
CRR073308Third green 32.507
CRR073309Second white 12.611
CRR073310Second white 23.255
CRR073311Second white 32.469
CRR073312Silver flowering 11.951
CRR073313Silver flowering 22.121
CRR073314Silver flowering 31.874
CRR073315Gold flowering 17.000
CRR073316Gold flowering 29.049
CRR073317Gold flowering 34.820
CRR073318Tawny withering 18.314
CRR073319Tawny withering 210.165
CRR073320Tawny withering 310.618