Detail information of GWHGAAZE010476


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007034456.12.49903E-73Uncharacterized protein TCM_020392 [Theobroma cacao]
Swissprottr|Q9SD53|Y3720_ARATH2E-27UPF0481 protein At3g47200
trEMBLtr|A0A061ELY0|A0A061ELY0_THECC9E-74Uncharacterized protein {ECO:0000313|EMBL:EOY05382.1}
TAIR10AT3G50170.23E-43Plant protein of unknown function (DUF247)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene97712369772623+
GWHAAZE00000003mRNA97712369772623+
GWHAAZE00000003exon97712369772057+
GWHAAZE00000003exon97725979772623+
GWHAAZE00000003CDS97712369772057+
GWHAAZE00000003CDS97725979772623+
Transcript Sequence

Network for GWHGAAZE010476

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0028


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03140.16DUF247292751.60E-64
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.227
SRR3591706second leaf0.286
SRR3591707mature leaf0.223
SRR3591708Shoot apex0.194
SRR3591709Stem2.657
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.087
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.026
SRR8316901Third green stage 0.095
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.015
SRR6706288Light intensity 20%0.063
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.073
CNS0095594Slightly white alabastrum(diploid) 30.022
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.045
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.024
CNS0095604Slightly white alabastrum(tetraploid) 10.170
CNS0095605Slightly white alabastrum(tetraploid) 20.107
CNS0095606Slightly white alabastrum(tetraploid) 31.626
CNS0095607Whole white alabastrum(tetraploid) 10.191
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.096
CNS0095610Silvery flower (tetraploid) 10.091
CNS0095611Silvery flower (tetraploid) 20.165
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.064
CNS0095614Golden flower (tetraploid) 20.118
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.000
CRR073299Stem 30.000
CRR073300Leaf 10.000
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.027
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.031
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.153
CRR073319Tawny withering 20.112
CRR073320Tawny withering 30.052