Detail information of GWHGAAZE010492


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007033850.15.84994E-61Plant regulator RWP-RK family protein, putative isoform 3 [Theobroma cacao]
Swissprottr|Q9M1B0|NLP9_ARATH5E-44Protein NLP9
trEMBLtr|A0A061EIU7|A0A061EIU7_THECC2E-61Plant regulator RWP-RK family protein, putative isoform 3 {ECO:0000313|EMBL:EOY04776.1}
TAIR10AT3G59580.22E-39Plant regulator RWP-RK family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1103332211034488+
GWHAAZE00000003mRNA1103332211034488+
GWHAAZE00000003exon1103332211033442+
GWHAAZE00000003exon1103383611034488+
GWHAAZE00000003CDS1103332211033442+
GWHAAZE00000003CDS1103383611034488+
Transcript Sequence

Network for GWHGAAZE010492

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02042.16RWP-RK18842.10E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyRWP-RK

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.577
SRR3591706second leaf5.904
SRR3591707mature leaf9.778
SRR3591708Shoot apex10.408
SRR3591709Stem11.007
SRR3591710White floral bud15.261
SRR3591711White flower13.496
SRR3591712Green floral bud14.529
SRR3591713Yellow flower10.566
SRP173429 SRR8316895Juvenile bud stage 5.547
SRR8316896Juvenile bud stage 8.411
SRR8316897Juvenile bud stage 4.148
SRR8316894Third green stage 4.634
SRR8316900Third green stage 10.093
SRR8316901Third green stage 9.922
SRR8316898Complete white stage 4.014
SRR8316899Complete white stage 16.501
SRR8316903Complete white stage 8.932
SRR8316902Silver flowering stage6.696
SRR8316904Silver flowering stage9.285
SRR8316905Silver flowering stage4.091
SRR8316906Gold flowering stage 11.363
SRR8316907Gold flowering stage 11.132
SRR8316908Gold flowering stage 12.089
SRP132670SRR6706286Control9.657
SRR6706287Light intensity 50%12.270
SRR6706288Light intensity 20%11.949
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.252
CNS0095593Slightly white alabastrum(diploid) 26.165
CNS0095594Slightly white alabastrum(diploid) 34.002
CNS0095595Whole white alabastrum(diploid) 24.033
CNS0095596Whole white alabastrum(diploid) 34.864
CNS0095597Whole white alabastrum(diploid) 45.678
CNS0095598Silvery flower (diploied) 17.390
CNS0095599Silvery flower (diploied) 27.301
CNS0095600Silvery flower (diploied) 316.453
CNS0095601Golden flower (diploid) 18.088
CNS0095602Golden flower (diploid) 213.368
CNS0095603Golden flower (diploid) 313.486
CNS0095604Slightly white alabastrum(tetraploid) 15.865
CNS0095605Slightly white alabastrum(tetraploid) 23.915
CNS0095606Slightly white alabastrum(tetraploid) 312.517
CNS0095607Whole white alabastrum(tetraploid) 12.772
CNS0095608Whole white alabastrum(tetraploid) 22.877
CNS0095609Whole white alabastrum(tetraploid) 38.052
CNS0095610Silvery flower (tetraploid) 112.629
CNS0095611Silvery flower (tetraploid) 211.893
CNS0095612Silvery flower (tetraploid) 318.425
CNS0095613Golden flower (tetraploid) 18.309
CNS0095614Golden flower (tetraploid) 215.941
CNS0095615Golden flower (tetraploid) 314.629
CRA001975CRR073297Stem 116.601
CRR073298Stem 213.532
CRR073299Stem 310.424
CRR073300Leaf 119.526
CRR073301Leaf 217.301
CRR073302Leaf 310.961
CRR073303Juvenile bud 114.193
CRR073304Juvenile bud 211.981
CRR073305Juvenile bud 317.718
CRR073306Third green 19.135
CRR073307Third green 24.429
CRR073308Third green 38.391
CRR073309Second white 18.369
CRR073310Second white 214.755
CRR073311Second white 315.376
CRR073312Silver flowering 111.938
CRR073313Silver flowering 211.451
CRR073314Silver flowering 39.602
CRR073315Gold flowering 113.027
CRR073316Gold flowering 212.884
CRR073317Gold flowering 314.334
CRR073318Tawny withering 110.978
CRR073319Tawny withering 29.457
CRR073320Tawny withering 39.749