Detail information of GWHGAAZE010534


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010097720.14.3527E-1223-hydroxyisobutyryl-CoA hydrolase 1 [Morus notabilis]
Swissprottr|Q9LKJ1|HIBC1_ARATH9E-1093-hydroxyisobutyryl-CoA hydrolase 1
trEMBLtr|W9RDH3|W9RDH3_9ROSA2E-1223-hydroxyisobutyryl-CoA hydrolase 1 {ECO:0000313|EMBL:EXB70675.1}
TAIR10AT5G65940.11E-88beta-hydroxyisobutyryl-CoA hydrolase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1293538312939876-
GWHAAZE00000003mRNA1293538312939876-
GWHAAZE00000003exon1293979812939876-
GWHAAZE00000003exon1293961812939703-
GWHAAZE00000003exon1293864812938769-
GWHAAZE00000003exon1293833012938390-
GWHAAZE00000003exon1293804112938139-
GWHAAZE00000003exon1293714712937248-
GWHAAZE00000003exon1293642112936462-
GWHAAZE00000003exon1293538312935844-
GWHAAZE00000003CDS1293979812939876-
GWHAAZE00000003CDS1293961812939703-
GWHAAZE00000003CDS1293864812938769-
GWHAAZE00000003CDS1293833012938390-
GWHAAZE00000003CDS1293804112938139-
GWHAAZE00000003CDS1293714712937248-
GWHAAZE00000003CDS1293642112936462-
GWHAAZE00000003CDS1293570712935844-
GWHAAZE00000003three_prime_UTR1293538312935706-
Transcript Sequence

Network for GWHGAAZE010534

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16113.6ECH_2252151.20E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05605HIBCH Metabolic pathways map01100
Carbon metabolismmap01200
Propanoate metabolismmap00640
Valine, leucine and isoleucine degradationmap00280
beta-Alanine metabolismmap00410

Gene Ontology

GO term OntologyName
GO:0003860molecular_function3-hydroxyisobutyryl-CoA hydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.045
SRR3591706second leaf0.362
SRR3591707mature leaf0.195
SRR3591708Shoot apex0.000
SRR3591709Stem0.313
SRR3591710White floral bud0.031
SRR3591711White flower0.071
SRR3591712Green floral bud0.221
SRR3591713Yellow flower0.076
SRP173429 SRR8316895Juvenile bud stage 0.673
SRR8316896Juvenile bud stage 0.903
SRR8316897Juvenile bud stage 0.741
SRR8316894Third green stage 0.320
SRR8316900Third green stage 0.571
SRR8316901Third green stage 0.728
SRR8316898Complete white stage 0.296
SRR8316899Complete white stage 1.276
SRR8316903Complete white stage 0.985
SRR8316902Silver flowering stage0.413
SRR8316904Silver flowering stage0.751
SRR8316905Silver flowering stage0.304
SRR8316906Gold flowering stage 0.862
SRR8316907Gold flowering stage 0.434
SRR8316908Gold flowering stage 0.549
SRP132670SRR6706286Control0.225
SRR6706287Light intensity 50%0.272
SRR6706288Light intensity 20%0.273
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.185
CNS0095593Slightly white alabastrum(diploid) 20.364
CNS0095594Slightly white alabastrum(diploid) 31.721
CNS0095595Whole white alabastrum(diploid) 21.391
CNS0095596Whole white alabastrum(diploid) 30.345
CNS0095597Whole white alabastrum(diploid) 41.073
CNS0095598Silvery flower (diploied) 10.997
CNS0095599Silvery flower (diploied) 21.147
CNS0095600Silvery flower (diploied) 30.508
CNS0095601Golden flower (diploid) 11.467
CNS0095602Golden flower (diploid) 20.601
CNS0095603Golden flower (diploid) 30.437
CNS0095604Slightly white alabastrum(tetraploid) 11.006
CNS0095605Slightly white alabastrum(tetraploid) 20.727
CNS0095606Slightly white alabastrum(tetraploid) 30.821
CNS0095607Whole white alabastrum(tetraploid) 10.733
CNS0095608Whole white alabastrum(tetraploid) 20.348
CNS0095609Whole white alabastrum(tetraploid) 30.281
CNS0095610Silvery flower (tetraploid) 10.885
CNS0095611Silvery flower (tetraploid) 20.578
CNS0095612Silvery flower (tetraploid) 31.148
CNS0095613Golden flower (tetraploid) 10.794
CNS0095614Golden flower (tetraploid) 20.432
CNS0095615Golden flower (tetraploid) 30.354
CRA001975CRR073297Stem 11.145
CRR073298Stem 20.287
CRR073299Stem 30.000
CRR073300Leaf 10.767
CRR073301Leaf 20.323
CRR073302Leaf 30.098
CRR073303Juvenile bud 10.107
CRR073304Juvenile bud 20.047
CRR073305Juvenile bud 30.022
CRR073306Third green 10.071
CRR073307Third green 20.071
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.043
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.036
CRR073315Gold flowering 10.067
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.133
CRR073319Tawny withering 20.825
CRR073320Tawny withering 30.139