Detail information of GWHGAAZE010564


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP25256.14.91145E-31hypothetical protein JCGZ_20412 [Jatropha curcas]
Swissprottr|Q9SXA0|FB42_ARATH6E-23Putative F-box protein At1g47730
trEMBLtr|A0A067JMR0|A0A067JMR0_JATCU2E-31Uncharacterized protein {ECO:0000313|EMBL:KDP25256.1}
TAIR10AT1G47730.11E-20F-box and associated interaction domains-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1432756614328477+
GWHAAZE00000003mRNA1432756614328477+
GWHAAZE00000003exon1432756614328477+
GWHAAZE00000003CDS1432756614328477+
Transcript Sequence

Network for GWHGAAZE010564

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box12486.50E-09
PF08268.13FBA_32172788.50E-06
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.814
SRR3591706second leaf2.651
SRR3591707mature leaf1.742
SRR3591708Shoot apex4.543
SRR3591709Stem3.006
SRR3591710White floral bud2.101
SRR3591711White flower2.570
SRR3591712Green floral bud3.245
SRR3591713Yellow flower0.606
SRP173429 SRR8316895Juvenile bud stage 0.502
SRR8316896Juvenile bud stage 0.677
SRR8316897Juvenile bud stage 0.650
SRR8316894Third green stage 0.598
SRR8316900Third green stage 1.400
SRR8316901Third green stage 0.887
SRR8316898Complete white stage 0.079
SRR8316899Complete white stage 0.644
SRR8316903Complete white stage 0.993
SRR8316902Silver flowering stage0.080
SRR8316904Silver flowering stage0.531
SRR8316905Silver flowering stage0.112
SRR8316906Gold flowering stage 0.166
SRR8316907Gold flowering stage 0.242
SRR8316908Gold flowering stage 0.383
SRP132670SRR6706286Control2.543
SRR6706287Light intensity 50%1.816
SRR6706288Light intensity 20%1.924
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.025
CNS0095593Slightly white alabastrum(diploid) 21.471
CNS0095594Slightly white alabastrum(diploid) 30.757
CNS0095595Whole white alabastrum(diploid) 21.273
CNS0095596Whole white alabastrum(diploid) 31.532
CNS0095597Whole white alabastrum(diploid) 40.775
CNS0095598Silvery flower (diploied) 10.375
CNS0095599Silvery flower (diploied) 20.789
CNS0095600Silvery flower (diploied) 31.153
CNS0095601Golden flower (diploid) 10.872
CNS0095602Golden flower (diploid) 21.216
CNS0095603Golden flower (diploid) 30.376
CNS0095604Slightly white alabastrum(tetraploid) 14.025
CNS0095605Slightly white alabastrum(tetraploid) 23.405
CNS0095606Slightly white alabastrum(tetraploid) 35.200
CNS0095607Whole white alabastrum(tetraploid) 11.882
CNS0095608Whole white alabastrum(tetraploid) 21.200
CNS0095609Whole white alabastrum(tetraploid) 32.681
CNS0095610Silvery flower (tetraploid) 10.926
CNS0095611Silvery flower (tetraploid) 21.335
CNS0095612Silvery flower (tetraploid) 31.710
CNS0095613Golden flower (tetraploid) 10.804
CNS0095614Golden flower (tetraploid) 20.802
CNS0095615Golden flower (tetraploid) 30.363
CRA001975CRR073297Stem 12.015
CRR073298Stem 22.257
CRR073299Stem 31.908
CRR073300Leaf 11.326
CRR073301Leaf 20.760
CRR073302Leaf 31.182
CRR073303Juvenile bud 10.627
CRR073304Juvenile bud 20.330
CRR073305Juvenile bud 30.673
CRR073306Third green 10.000
CRR073307Third green 20.117
CRR073308Third green 30.060
CRR073309Second white 10.348
CRR073310Second white 20.000
CRR073311Second white 30.468
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.067
CRR073315Gold flowering 10.857
CRR073316Gold flowering 20.544
CRR073317Gold flowering 30.445
CRR073318Tawny withering 11.267
CRR073319Tawny withering 20.117
CRR073320Tawny withering 30.169