Detail information of GWHGAAZE010565


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP25256.16.77249E-33hypothetical protein JCGZ_20412 [Jatropha curcas]
Swissprottr|Q9C6J3|FB52_ARATH6E-26Putative F-box protein At1g50870
trEMBLtr|A0A067JMR0|A0A067JMR0_JATCU3E-33Uncharacterized protein {ECO:0000313|EMBL:KDP25256.1}
TAIR10AT1G50870.15E-23F-box and associated interaction domains-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1436652614367428+
GWHAAZE00000003mRNA1436652614367428+
GWHAAZE00000003exon1436652614367428+
GWHAAZE00000003CDS1436652614367428+
Transcript Sequence

Network for GWHGAAZE010565

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box14482.20E-08
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.201
SRR3591706second leaf0.426
SRR3591707mature leaf0.608
SRR3591708Shoot apex0.900
SRR3591709Stem0.930
SRR3591710White floral bud1.090
SRR3591711White flower0.800
SRR3591712Green floral bud0.843
SRR3591713Yellow flower0.213
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.556
SRR8316897Juvenile bud stage 0.515
SRR8316894Third green stage 0.079
SRR8316900Third green stage 0.405
SRR8316901Third green stage 0.496
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.022
SRR8316903Complete white stage 0.001
SRR8316902Silver flowering stage0.076
SRR8316904Silver flowering stage0.053
SRR8316905Silver flowering stage0.061
SRR8316906Gold flowering stage 0.528
SRR8316907Gold flowering stage 0.078
SRR8316908Gold flowering stage 0.405
SRP132670SRR6706286Control0.280
SRR6706287Light intensity 50%0.187
SRR6706288Light intensity 20%0.274
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.224
CNS0095593Slightly white alabastrum(diploid) 20.361
CNS0095594Slightly white alabastrum(diploid) 30.880
CNS0095595Whole white alabastrum(diploid) 20.660
CNS0095596Whole white alabastrum(diploid) 30.494
CNS0095597Whole white alabastrum(diploid) 40.518
CNS0095598Silvery flower (diploied) 10.089
CNS0095599Silvery flower (diploied) 20.044
CNS0095600Silvery flower (diploied) 30.024
CNS0095601Golden flower (diploid) 10.093
CNS0095602Golden flower (diploid) 20.195
CNS0095603Golden flower (diploid) 30.164
CNS0095604Slightly white alabastrum(tetraploid) 12.106
CNS0095605Slightly white alabastrum(tetraploid) 21.315
CNS0095606Slightly white alabastrum(tetraploid) 30.979
CNS0095607Whole white alabastrum(tetraploid) 11.117
CNS0095608Whole white alabastrum(tetraploid) 20.836
CNS0095609Whole white alabastrum(tetraploid) 31.352
CNS0095610Silvery flower (tetraploid) 10.793
CNS0095611Silvery flower (tetraploid) 20.763
CNS0095612Silvery flower (tetraploid) 30.637
CNS0095613Golden flower (tetraploid) 11.072
CNS0095614Golden flower (tetraploid) 21.068
CNS0095615Golden flower (tetraploid) 30.466
CRA001975CRR073297Stem 10.175
CRR073298Stem 20.337
CRR073299Stem 30.000
CRR073300Leaf 10.483
CRR073301Leaf 20.211
CRR073302Leaf 30.132
CRR073303Juvenile bud 10.156
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.145
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.209
CRR073319Tawny withering 20.046
CRR073320Tawny withering 30.000