Detail information of GWHGAAZE010580


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP25256.11.32451E-30hypothetical protein JCGZ_20412 [Jatropha curcas]
Swissprottr|Q9SXA0|FB42_ARATH3E-24Putative F-box protein At1g47730
trEMBLtr|A0A067JMR0|A0A067JMR0_JATCU5E-31Uncharacterized protein {ECO:0000313|EMBL:KDP25256.1}
TAIR10AT1G47730.16E-22F-box and associated interaction domains-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1461054714611464+
GWHAAZE00000003mRNA1461054714611464+
GWHAAZE00000003exon1461054714611464+
GWHAAZE00000003CDS1461054714611464+
Transcript Sequence

Network for GWHGAAZE010580

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box14506.60E-09
PF08268.13FBA_32202801.30E-05
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.454
SRR3591706second leaf0.718
SRR3591707mature leaf1.402
SRR3591708Shoot apex2.077
SRR3591709Stem0.607
SRR3591710White floral bud0.862
SRR3591711White flower0.815
SRR3591712Green floral bud1.582
SRR3591713Yellow flower0.714
SRP173429 SRR8316895Juvenile bud stage 0.658
SRR8316896Juvenile bud stage 1.625
SRR8316897Juvenile bud stage 0.064
SRR8316894Third green stage 0.497
SRR8316900Third green stage 1.787
SRR8316901Third green stage 1.131
SRR8316898Complete white stage 0.117
SRR8316899Complete white stage 1.162
SRR8316903Complete white stage 0.341
SRR8316902Silver flowering stage0.021
SRR8316904Silver flowering stage0.147
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.163
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.036
SRP132670SRR6706286Control3.066
SRR6706287Light intensity 50%2.389
SRR6706288Light intensity 20%2.307
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.886
CNS0095593Slightly white alabastrum(diploid) 21.777
CNS0095594Slightly white alabastrum(diploid) 32.133
CNS0095595Whole white alabastrum(diploid) 21.908
CNS0095596Whole white alabastrum(diploid) 31.192
CNS0095597Whole white alabastrum(diploid) 40.368
CNS0095598Silvery flower (diploied) 11.173
CNS0095599Silvery flower (diploied) 21.262
CNS0095600Silvery flower (diploied) 30.566
CNS0095601Golden flower (diploid) 11.293
CNS0095602Golden flower (diploid) 20.842
CNS0095603Golden flower (diploid) 30.837
CNS0095604Slightly white alabastrum(tetraploid) 10.801
CNS0095605Slightly white alabastrum(tetraploid) 20.474
CNS0095606Slightly white alabastrum(tetraploid) 31.320
CNS0095607Whole white alabastrum(tetraploid) 10.189
CNS0095608Whole white alabastrum(tetraploid) 20.289
CNS0095609Whole white alabastrum(tetraploid) 30.687
CNS0095610Silvery flower (tetraploid) 10.257
CNS0095611Silvery flower (tetraploid) 20.134
CNS0095612Silvery flower (tetraploid) 30.413
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.137
CNS0095615Golden flower (tetraploid) 30.038
CRA001975CRR073297Stem 12.645
CRR073298Stem 23.352
CRR073299Stem 32.537
CRR073300Leaf 11.827
CRR073301Leaf 22.344
CRR073302Leaf 31.575
CRR073303Juvenile bud 11.363
CRR073304Juvenile bud 20.837
CRR073305Juvenile bud 31.617
CRR073306Third green 10.030
CRR073307Third green 20.105
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.215
CRR073316Gold flowering 20.871
CRR073317Gold flowering 31.468
CRR073318Tawny withering 10.996
CRR073319Tawny withering 20.549
CRR073320Tawny withering 31.030