Detail information of GWHGAAZE010583


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP25256.11.2381E-22hypothetical protein JCGZ_20412 [Jatropha curcas]
Swissprottr|Q9FZF8|FB44_ARATH1E-22Putative F-box protein At1g47790
trEMBLtr|A0A067JMR0|A0A067JMR0_JATCU5E-23Uncharacterized protein {ECO:0000313|EMBL:KDP25256.1}
TAIR10AT1G47790.12E-20F-box and associated interaction domains-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1467362914674519-
GWHAAZE00000003mRNA1467362914674519-
GWHAAZE00000003exon1467362914674519-
GWHAAZE00000003CDS1467362914674519-
Transcript Sequence

Network for GWHGAAZE010583

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box11477.90E-09
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.868
SRR3591706second leaf0.534
SRR3591707mature leaf0.490
SRR3591708Shoot apex2.248
SRR3591709Stem2.881
SRR3591710White floral bud1.307
SRR3591711White flower2.527
SRR3591712Green floral bud2.921
SRR3591713Yellow flower1.892
SRP173429 SRR8316895Juvenile bud stage 0.342
SRR8316896Juvenile bud stage 1.167
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.641
SRR8316900Third green stage 0.878
SRR8316901Third green stage 0.617
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.550
SRR8316907Gold flowering stage 1.127
SRR8316908Gold flowering stage 0.382
SRP132670SRR6706286Control0.384
SRR6706287Light intensity 50%0.157
SRR6706288Light intensity 20%0.199
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.419
CNS0095593Slightly white alabastrum(diploid) 21.040
CNS0095594Slightly white alabastrum(diploid) 31.685
CNS0095595Whole white alabastrum(diploid) 20.926
CNS0095596Whole white alabastrum(diploid) 31.071
CNS0095597Whole white alabastrum(diploid) 41.180
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.566
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.452
CNS0095603Golden flower (diploid) 30.704
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.004
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.161
CRR073298Stem 20.932
CRR073299Stem 30.169
CRR073300Leaf 11.540
CRR073301Leaf 21.177
CRR073302Leaf 30.289
CRR073303Juvenile bud 10.347
CRR073304Juvenile bud 20.367
CRR073305Juvenile bud 30.139
CRR073306Third green 10.000
CRR073307Third green 20.140
CRR073308Third green 30.159
CRR073309Second white 10.010
CRR073310Second white 20.078
CRR073311Second white 30.125
CRR073312Silver flowering 10.057
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.100
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.054
CRR073317Gold flowering 30.019
CRR073318Tawny withering 10.053
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000