Detail information of GWHGAAZE010587


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP25256.13.26767E-33hypothetical protein JCGZ_20412 [Jatropha curcas]
Swissprottr|Q9C6J3|FB52_ARATH8E-24Putative F-box protein At1g50870
trEMBLtr|A0A067JMR0|A0A067JMR0_JATCU1E-33Uncharacterized protein {ECO:0000313|EMBL:KDP25256.1}
TAIR10AT1G50870.12E-21F-box and associated interaction domains-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1472050614721354+
GWHAAZE00000003mRNA1472050614721354+
GWHAAZE00000003exon1472050614721354+
GWHAAZE00000003CDS1472050614721354+
Transcript Sequence

Network for GWHGAAZE010587

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12937.8F-box-like5399.00E-09
PF08268.13FBA_32032704.50E-06
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.488
SRR3591706second leaf1.073
SRR3591707mature leaf1.396
SRR3591708Shoot apex1.996
SRR3591709Stem1.849
SRR3591710White floral bud2.132
SRR3591711White flower1.368
SRR3591712Green floral bud1.655
SRR3591713Yellow flower1.446
SRP173429 SRR8316895Juvenile bud stage 0.677
SRR8316896Juvenile bud stage 0.689
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.485
SRR8316900Third green stage 1.707
SRR8316901Third green stage 0.967
SRR8316898Complete white stage 0.454
SRR8316899Complete white stage 2.230
SRR8316903Complete white stage 0.945
SRR8316902Silver flowering stage0.319
SRR8316904Silver flowering stage0.724
SRR8316905Silver flowering stage0.379
SRR8316906Gold flowering stage 0.828
SRR8316907Gold flowering stage 1.145
SRR8316908Gold flowering stage 0.560
SRP132670SRR6706286Control0.871
SRR6706287Light intensity 50%0.945
SRR6706288Light intensity 20%1.027
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.249
CNS0095593Slightly white alabastrum(diploid) 20.679
CNS0095594Slightly white alabastrum(diploid) 30.739
CNS0095595Whole white alabastrum(diploid) 20.719
CNS0095596Whole white alabastrum(diploid) 30.334
CNS0095597Whole white alabastrum(diploid) 40.768
CNS0095598Silvery flower (diploied) 10.568
CNS0095599Silvery flower (diploied) 21.219
CNS0095600Silvery flower (diploied) 30.845
CNS0095601Golden flower (diploid) 10.185
CNS0095602Golden flower (diploid) 21.021
CNS0095603Golden flower (diploid) 31.267
CNS0095604Slightly white alabastrum(tetraploid) 10.226
CNS0095605Slightly white alabastrum(tetraploid) 20.053
CNS0095606Slightly white alabastrum(tetraploid) 30.298
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.069
CNS0095610Silvery flower (tetraploid) 10.025
CNS0095611Silvery flower (tetraploid) 20.418
CNS0095612Silvery flower (tetraploid) 30.263
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.059
CNS0095615Golden flower (tetraploid) 30.522
CRA001975CRR073297Stem 11.384
CRR073298Stem 21.434
CRR073299Stem 30.988
CRR073300Leaf 10.768
CRR073301Leaf 20.611
CRR073302Leaf 30.275
CRR073303Juvenile bud 11.288
CRR073304Juvenile bud 20.445
CRR073305Juvenile bud 30.991
CRR073306Third green 10.832
CRR073307Third green 20.442
CRR073308Third green 30.355
CRR073309Second white 10.421
CRR073310Second white 20.253
CRR073311Second white 30.000
CRR073312Silver flowering 10.056
CRR073313Silver flowering 20.062
CRR073314Silver flowering 30.118
CRR073315Gold flowering 10.093
CRR073316Gold flowering 20.250
CRR073317Gold flowering 30.199
CRR073318Tawny withering 10.905
CRR073319Tawny withering 20.244
CRR073320Tawny withering 30.789