Detail information of GWHGAAZE010657


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010650577.16.50701E-89PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
Swissprottr|Q9SZL8|FRS5_ARATH2E-19Protein FAR1-RELATED SEQUENCE 5
trEMBLtr|F6HYS5|F6HYS5_VITVI2E-89Putative uncharacterized protein {ECO:0000313|EMBL:CCB59839.1}
TAIR10AT3G59470.24E-21Far-red impaired responsive (FAR1) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1812490318125490+
GWHAAZE00000003mRNA1812490318125490+
GWHAAZE00000003exon1812490318125490+
GWHAAZE00000003CDS1812490318125490+
Transcript Sequence

Network for GWHGAAZE010657

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.16FAR1761695.80E-25
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.180
SRR3591706second leaf0.757
SRR3591707mature leaf0.670
SRR3591708Shoot apex1.845
SRR3591709Stem2.051
SRR3591710White floral bud2.071
SRR3591711White flower1.439
SRR3591712Green floral bud1.998
SRR3591713Yellow flower0.667
SRP173429 SRR8316895Juvenile bud stage 0.662
SRR8316896Juvenile bud stage 1.561
SRR8316897Juvenile bud stage 0.281
SRR8316894Third green stage 0.984
SRR8316900Third green stage 2.073
SRR8316901Third green stage 2.332
SRR8316898Complete white stage 0.956
SRR8316899Complete white stage 4.528
SRR8316903Complete white stage 2.800
SRR8316902Silver flowering stage1.317
SRR8316904Silver flowering stage1.517
SRR8316905Silver flowering stage0.336
SRR8316906Gold flowering stage 3.201
SRR8316907Gold flowering stage 1.876
SRR8316908Gold flowering stage 1.800
SRP132670SRR6706286Control2.580
SRR6706287Light intensity 50%1.715
SRR6706288Light intensity 20%1.557
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.548
CNS0095593Slightly white alabastrum(diploid) 21.461
CNS0095594Slightly white alabastrum(diploid) 30.814
CNS0095595Whole white alabastrum(diploid) 20.324
CNS0095596Whole white alabastrum(diploid) 31.175
CNS0095597Whole white alabastrum(diploid) 42.275
CNS0095598Silvery flower (diploied) 11.029
CNS0095599Silvery flower (diploied) 21.045
CNS0095600Silvery flower (diploied) 32.106
CNS0095601Golden flower (diploid) 13.356
CNS0095602Golden flower (diploid) 21.215
CNS0095603Golden flower (diploid) 31.105
CNS0095604Slightly white alabastrum(tetraploid) 10.519
CNS0095605Slightly white alabastrum(tetraploid) 20.521
CNS0095606Slightly white alabastrum(tetraploid) 30.869
CNS0095607Whole white alabastrum(tetraploid) 10.090
CNS0095608Whole white alabastrum(tetraploid) 20.675
CNS0095609Whole white alabastrum(tetraploid) 30.283
CNS0095610Silvery flower (tetraploid) 10.317
CNS0095611Silvery flower (tetraploid) 20.422
CNS0095612Silvery flower (tetraploid) 30.236
CNS0095613Golden flower (tetraploid) 10.288
CNS0095614Golden flower (tetraploid) 20.389
CNS0095615Golden flower (tetraploid) 30.124
CRA001975CRR073297Stem 12.406
CRR073298Stem 22.276
CRR073299Stem 33.586
CRR073300Leaf 13.279
CRR073301Leaf 23.606
CRR073302Leaf 33.215
CRR073303Juvenile bud 11.478
CRR073304Juvenile bud 20.958
CRR073305Juvenile bud 31.276
CRR073306Third green 10.302
CRR073307Third green 20.796
CRR073308Third green 30.384
CRR073309Second white 10.705
CRR073310Second white 20.117
CRR073311Second white 30.922
CRR073312Silver flowering 10.155
CRR073313Silver flowering 20.906
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.034
CRR073316Gold flowering 22.050
CRR073317Gold flowering 30.515
CRR073318Tawny withering 10.734
CRR073319Tawny withering 21.213
CRR073320Tawny withering 30.589