Detail information of GWHGAAZE010665


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010650574.13.3028E-117PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X2 [Vitis vinifera]
Swissprottr|Q9SZL8|FRS5_ARATH5E-23Protein FAR1-RELATED SEQUENCE 5
trEMBLtr|F6HYS2|F6HYS2_VITVI1E-117Putative uncharacterized protein {ECO:0000313|EMBL:CCB59836.1}
TAIR10AT3G07500.11E-37Far-red impaired responsive (FAR1) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1868165418684848+
GWHAAZE00000003mRNA1868165418684848+
GWHAAZE00000003exon1868165418682187+
GWHAAZE00000003exon1868464218684848+
GWHAAZE00000003CDS1868165418682187+
GWHAAZE00000003CDS1868464218684848+
Transcript Sequence

Network for GWHGAAZE010665

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0007


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.16FAR1691634.90E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.330
SRR3591706second leaf1.169
SRR3591707mature leaf2.531
SRR3591708Shoot apex2.192
SRR3591709Stem6.562
SRR3591710White floral bud6.009
SRR3591711White flower7.451
SRR3591712Green floral bud6.343
SRR3591713Yellow flower3.777
SRP173429 SRR8316895Juvenile bud stage 2.360
SRR8316896Juvenile bud stage 2.981
SRR8316897Juvenile bud stage 1.666
SRR8316894Third green stage 1.919
SRR8316900Third green stage 4.674
SRR8316901Third green stage 5.787
SRR8316898Complete white stage 1.609
SRR8316899Complete white stage 6.657
SRR8316903Complete white stage 3.652
SRR8316902Silver flowering stage1.853
SRR8316904Silver flowering stage3.490
SRR8316905Silver flowering stage1.407
SRR8316906Gold flowering stage 6.070
SRR8316907Gold flowering stage 5.444
SRR8316908Gold flowering stage 4.814
SRP132670SRR6706286Control5.093
SRR6706287Light intensity 50%5.022
SRR6706288Light intensity 20%4.341
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.150
CNS0095593Slightly white alabastrum(diploid) 24.455
CNS0095594Slightly white alabastrum(diploid) 34.387
CNS0095595Whole white alabastrum(diploid) 22.845
CNS0095596Whole white alabastrum(diploid) 34.572
CNS0095597Whole white alabastrum(diploid) 44.880
CNS0095598Silvery flower (diploied) 14.434
CNS0095599Silvery flower (diploied) 22.516
CNS0095600Silvery flower (diploied) 35.293
CNS0095601Golden flower (diploid) 13.676
CNS0095602Golden flower (diploid) 25.227
CNS0095603Golden flower (diploid) 35.954
CNS0095604Slightly white alabastrum(tetraploid) 18.245
CNS0095605Slightly white alabastrum(tetraploid) 213.453
CNS0095606Slightly white alabastrum(tetraploid) 39.465
CNS0095607Whole white alabastrum(tetraploid) 110.758
CNS0095608Whole white alabastrum(tetraploid) 27.424
CNS0095609Whole white alabastrum(tetraploid) 38.352
CNS0095610Silvery flower (tetraploid) 111.271
CNS0095611Silvery flower (tetraploid) 210.123
CNS0095612Silvery flower (tetraploid) 311.331
CNS0095613Golden flower (tetraploid) 111.081
CNS0095614Golden flower (tetraploid) 211.052
CNS0095615Golden flower (tetraploid) 39.139
CRA001975CRR073297Stem 11.187
CRR073298Stem 22.107
CRR073299Stem 32.519
CRR073300Leaf 12.095
CRR073301Leaf 22.505
CRR073302Leaf 33.056
CRR073303Juvenile bud 12.484
CRR073304Juvenile bud 21.535
CRR073305Juvenile bud 31.961
CRR073306Third green 11.877
CRR073307Third green 23.622
CRR073308Third green 31.923
CRR073309Second white 11.736
CRR073310Second white 21.758
CRR073311Second white 31.926
CRR073312Silver flowering 11.924
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.799
CRR073316Gold flowering 21.181
CRR073317Gold flowering 30.671
CRR073318Tawny withering 12.054
CRR073319Tawny withering 22.041
CRR073320Tawny withering 30.516