Detail information of GWHGAAZE010670


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010650577.14.02707E-94PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
Swissprottr|Q9SZL8|FRS5_ARATH4E-19Protein FAR1-RELATED SEQUENCE 5
trEMBLtr|F6HYS5|F6HYS5_VITVI2E-94Putative uncharacterized protein {ECO:0000313|EMBL:CCB59839.1}
TAIR10AT3G59470.23E-21Far-red impaired responsive (FAR1) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene1877430818774904+
GWHAAZE00000003mRNA1877430818774904+
GWHAAZE00000003exon1877430818774904+
GWHAAZE00000003CDS1877430818774904+
Transcript Sequence

Network for GWHGAAZE010670

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.16FAR1791724.10E-25
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.989
SRR3591706second leaf7.285
SRR3591707mature leaf4.754
SRR3591708Shoot apex8.828
SRR3591709Stem7.249
SRR3591710White floral bud8.015
SRR3591711White flower6.341
SRR3591712Green floral bud8.816
SRR3591713Yellow flower2.715
SRP173429 SRR8316895Juvenile bud stage 0.558
SRR8316896Juvenile bud stage 1.485
SRR8316897Juvenile bud stage 0.293
SRR8316894Third green stage 0.440
SRR8316900Third green stage 2.383
SRR8316901Third green stage 1.541
SRR8316898Complete white stage 2.036
SRR8316899Complete white stage 1.881
SRR8316903Complete white stage 1.821
SRR8316902Silver flowering stage0.853
SRR8316904Silver flowering stage1.144
SRR8316905Silver flowering stage0.489
SRR8316906Gold flowering stage 3.840
SRR8316907Gold flowering stage 1.159
SRR8316908Gold flowering stage 2.683
SRP132670SRR6706286Control1.532
SRR6706287Light intensity 50%1.566
SRR6706288Light intensity 20%1.729
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.611
CNS0095593Slightly white alabastrum(diploid) 21.199
CNS0095594Slightly white alabastrum(diploid) 30.545
CNS0095595Whole white alabastrum(diploid) 20.555
CNS0095596Whole white alabastrum(diploid) 31.599
CNS0095597Whole white alabastrum(diploid) 41.170
CNS0095598Silvery flower (diploied) 11.869
CNS0095599Silvery flower (diploied) 21.321
CNS0095600Silvery flower (diploied) 31.699
CNS0095601Golden flower (diploid) 12.820
CNS0095602Golden flower (diploid) 21.733
CNS0095603Golden flower (diploid) 31.763
CNS0095604Slightly white alabastrum(tetraploid) 12.377
CNS0095605Slightly white alabastrum(tetraploid) 22.533
CNS0095606Slightly white alabastrum(tetraploid) 35.042
CNS0095607Whole white alabastrum(tetraploid) 11.726
CNS0095608Whole white alabastrum(tetraploid) 22.008
CNS0095609Whole white alabastrum(tetraploid) 33.188
CNS0095610Silvery flower (tetraploid) 13.376
CNS0095611Silvery flower (tetraploid) 23.302
CNS0095612Silvery flower (tetraploid) 33.066
CNS0095613Golden flower (tetraploid) 11.580
CNS0095614Golden flower (tetraploid) 22.725
CNS0095615Golden flower (tetraploid) 31.424
CRA001975CRR073297Stem 11.705
CRR073298Stem 22.356
CRR073299Stem 34.168
CRR073300Leaf 13.015
CRR073301Leaf 22.268
CRR073302Leaf 31.243
CRR073303Juvenile bud 11.230
CRR073304Juvenile bud 21.913
CRR073305Juvenile bud 31.334
CRR073306Third green 10.456
CRR073307Third green 20.946
CRR073308Third green 30.285
CRR073309Second white 10.605
CRR073310Second white 21.289
CRR073311Second white 30.030
CRR073312Silver flowering 10.502
CRR073313Silver flowering 20.354
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.758
CRR073316Gold flowering 21.817
CRR073317Gold flowering 30.145
CRR073318Tawny withering 12.037
CRR073319Tawny withering 20.537
CRR073320Tawny withering 31.965