Detail information of GWHGAAZE010902


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002511947.10Protein UNUSUAL FLORAL ORGANS, putative [Ricinus communis]
Swissprottr|Q9M310|FBK77_ARATH0F-box/kelch-repeat protein At3g61590
trEMBLtr|B9RE08|B9RE08_RICCO0Protein UNUSUAL FLORAL ORGANS, putative {ECO:0000313|EMBL:EEF50616.1}
TAIR10AT3G61590.24E-163Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene3380561533806847-
GWHAAZE00000003mRNA3380561533806847-
GWHAAZE00000003exon3380561533806847-
GWHAAZE00000003CDS3380561533806847-
Transcript Sequence

Network for GWHGAAZE010902

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12937.8F-box-like47868.70E-10
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.043
SRR3591706second leaf1.341
SRR3591707mature leaf0.903
SRR3591708Shoot apex3.081
SRR3591709Stem11.241
SRR3591710White floral bud0.799
SRR3591711White flower0.515
SRR3591712Green floral bud2.661
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.311
SRR8316896Juvenile bud stage 1.245
SRR8316897Juvenile bud stage 0.253
SRR8316894Third green stage 1.315
SRR8316900Third green stage 2.366
SRR8316901Third green stage 3.087
SRR8316898Complete white stage 0.253
SRR8316899Complete white stage 1.467
SRR8316903Complete white stage 0.588
SRR8316902Silver flowering stage0.649
SRR8316904Silver flowering stage0.249
SRR8316905Silver flowering stage0.070
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.168
SRR8316908Gold flowering stage 0.071
SRP132670SRR6706286Control3.126
SRR6706287Light intensity 50%1.934
SRR6706288Light intensity 20%2.328
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.225
CNS0095593Slightly white alabastrum(diploid) 22.228
CNS0095594Slightly white alabastrum(diploid) 31.864
CNS0095595Whole white alabastrum(diploid) 22.018
CNS0095596Whole white alabastrum(diploid) 31.361
CNS0095597Whole white alabastrum(diploid) 42.803
CNS0095598Silvery flower (diploied) 10.151
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.341
CNS0095601Golden flower (diploid) 10.564
CNS0095602Golden flower (diploid) 20.093
CNS0095603Golden flower (diploid) 30.137
CNS0095604Slightly white alabastrum(tetraploid) 13.370
CNS0095605Slightly white alabastrum(tetraploid) 24.288
CNS0095606Slightly white alabastrum(tetraploid) 35.006
CNS0095607Whole white alabastrum(tetraploid) 11.235
CNS0095608Whole white alabastrum(tetraploid) 20.736
CNS0095609Whole white alabastrum(tetraploid) 31.773
CNS0095610Silvery flower (tetraploid) 10.208
CNS0095611Silvery flower (tetraploid) 20.317
CNS0095612Silvery flower (tetraploid) 30.023
CNS0095613Golden flower (tetraploid) 10.169
CNS0095614Golden flower (tetraploid) 20.043
CNS0095615Golden flower (tetraploid) 30.106
CRA001975CRR073297Stem 16.349
CRR073298Stem 25.743
CRR073299Stem 35.292
CRR073300Leaf 11.967
CRR073301Leaf 21.956
CRR073302Leaf 31.353
CRR073303Juvenile bud 10.806
CRR073304Juvenile bud 20.443
CRR073305Juvenile bud 30.906
CRR073306Third green 10.202
CRR073307Third green 20.226
CRR073308Third green 30.071
CRR073309Second white 10.000
CRR073310Second white 20.411
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.632
CRR073316Gold flowering 20.163
CRR073317Gold flowering 30.314
CRR073318Tawny withering 15.045
CRR073319Tawny withering 23.142
CRR073320Tawny withering 32.910