Detail information of GWHGAAZE010934


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP32578.12.65076E-67hypothetical protein JCGZ_13128 [Jatropha curcas]
trEMBLtr|A0A067KC32|A0A067KC32_JATCU1E-67Uncharacterized protein {ECO:0000313|EMBL:KDP32578.1}
TAIR10AT4G14200.10.00001Pentatricopeptide repeat (PPR) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene3565348535658054+
GWHAAZE00000003mRNA3565348535658054+
GWHAAZE00000003exon3565348535655771+
GWHAAZE00000003exon3565670835657196+
GWHAAZE00000003exon3565769635658054+
GWHAAZE00000003CDS3565348535655771+
GWHAAZE00000003CDS3565670835657196+
GWHAAZE00000003CDS3565769635657883+
GWHAAZE00000003three_prime_UTR3565788435658054+
Transcript Sequence

Network for GWHGAAZE010934

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.755
SRR3591706second leaf11.734
SRR3591707mature leaf13.556
SRR3591708Shoot apex25.644
SRR3591709Stem28.299
SRR3591710White floral bud34.738
SRR3591711White flower33.937
SRR3591712Green floral bud28.961
SRR3591713Yellow flower36.977
SRP173429 SRR8316895Juvenile bud stage 15.647
SRR8316896Juvenile bud stage 22.082
SRR8316897Juvenile bud stage 10.612
SRR8316894Third green stage 8.255
SRR8316900Third green stage 22.057
SRR8316901Third green stage 21.406
SRR8316898Complete white stage 9.641
SRR8316899Complete white stage 33.435
SRR8316903Complete white stage 21.894
SRR8316902Silver flowering stage10.433
SRR8316904Silver flowering stage15.109
SRR8316905Silver flowering stage7.011
SRR8316906Gold flowering stage 23.877
SRR8316907Gold flowering stage 20.457
SRR8316908Gold flowering stage 28.823
SRP132670SRR6706286Control16.532
SRR6706287Light intensity 50%15.349
SRR6706288Light intensity 20%15.831
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.158
CNS0095593Slightly white alabastrum(diploid) 216.861
CNS0095594Slightly white alabastrum(diploid) 318.410
CNS0095595Whole white alabastrum(diploid) 215.338
CNS0095596Whole white alabastrum(diploid) 311.378
CNS0095597Whole white alabastrum(diploid) 415.617
CNS0095598Silvery flower (diploied) 126.136
CNS0095599Silvery flower (diploied) 222.653
CNS0095600Silvery flower (diploied) 329.133
CNS0095601Golden flower (diploid) 129.666
CNS0095602Golden flower (diploid) 240.279
CNS0095603Golden flower (diploid) 336.904
CNS0095604Slightly white alabastrum(tetraploid) 121.931
CNS0095605Slightly white alabastrum(tetraploid) 217.896
CNS0095606Slightly white alabastrum(tetraploid) 336.846
CNS0095607Whole white alabastrum(tetraploid) 115.315
CNS0095608Whole white alabastrum(tetraploid) 212.484
CNS0095609Whole white alabastrum(tetraploid) 325.760
CNS0095610Silvery flower (tetraploid) 126.687
CNS0095611Silvery flower (tetraploid) 233.989
CNS0095612Silvery flower (tetraploid) 330.536
CNS0095613Golden flower (tetraploid) 117.510
CNS0095614Golden flower (tetraploid) 226.566
CNS0095615Golden flower (tetraploid) 324.138
CRA001975CRR073297Stem 129.703
CRR073298Stem 228.231
CRR073299Stem 324.485
CRR073300Leaf 130.679
CRR073301Leaf 227.861
CRR073302Leaf 320.525
CRR073303Juvenile bud 124.841
CRR073304Juvenile bud 219.128
CRR073305Juvenile bud 330.025
CRR073306Third green 113.292
CRR073307Third green 211.088
CRR073308Third green 314.686
CRR073309Second white 19.566
CRR073310Second white 213.477
CRR073311Second white 311.765
CRR073312Silver flowering 113.364
CRR073313Silver flowering 213.986
CRR073314Silver flowering 312.789
CRR073315Gold flowering 115.440
CRR073316Gold flowering 227.195
CRR073317Gold flowering 320.616
CRR073318Tawny withering 135.224
CRR073319Tawny withering 228.998
CRR073320Tawny withering 330.713