Detail information of GWHGAAZE010939


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN73299.10hypothetical protein VITISV_005183 [Vitis vinifera]
Swissprottr|Q9SRT2|BH062_ARATH3E-89Transcription factor bHLH62
trEMBLtr|A5AD41|A5AD41_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN73299.1}
TAIR10AT3G07340.13E-64basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene3570768035710396-
GWHAAZE00000003mRNA3570768035710396-
GWHAAZE00000003exon3570768035707717-
GWHAAZE00000003exon3570796335708041-
GWHAAZE00000003exon3570848835708718-
GWHAAZE00000003exon3570880435708875-
GWHAAZE00000003exon3570898135709049-
GWHAAZE00000003exon3570914035709205-
GWHAAZE00000003exon3570930735709507-
GWHAAZE00000003exon3570959635710396-
GWHAAZE00000003CDS3570959635710396-
GWHAAZE00000003CDS3570930735709507-
GWHAAZE00000003CDS3570914035709205-
GWHAAZE00000003CDS3570898135709049-
GWHAAZE00000003CDS3570880435708875-
GWHAAZE00000003CDS3570848835708718-
GWHAAZE00000003CDS3570796335708041-
GWHAAZE00000003CDS3570768035707717-
Transcript Sequence

Network for GWHGAAZE010939

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.27HLH3283757.30E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf32.669
SRR3591706second leaf29.386
SRR3591707mature leaf21.015
SRR3591708Shoot apex15.904
SRR3591709Stem33.987
SRR3591710White floral bud32.936
SRR3591711White flower25.054
SRR3591712Green floral bud15.968
SRR3591713Yellow flower6.869
SRP173429 SRR8316895Juvenile bud stage 4.034
SRR8316896Juvenile bud stage 4.376
SRR8316897Juvenile bud stage 1.320
SRR8316894Third green stage 3.053
SRR8316900Third green stage 8.151
SRR8316901Third green stage 6.900
SRR8316898Complete white stage 8.839
SRR8316899Complete white stage 14.556
SRR8316903Complete white stage 13.766
SRR8316902Silver flowering stage5.057
SRR8316904Silver flowering stage9.803
SRR8316905Silver flowering stage5.449
SRR8316906Gold flowering stage 12.990
SRR8316907Gold flowering stage 6.391
SRR8316908Gold flowering stage 10.154
SRP132670SRR6706286Control7.059
SRR6706287Light intensity 50%8.396
SRR6706288Light intensity 20%7.941
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.508
CNS0095593Slightly white alabastrum(diploid) 28.759
CNS0095594Slightly white alabastrum(diploid) 34.565
CNS0095595Whole white alabastrum(diploid) 25.136
CNS0095596Whole white alabastrum(diploid) 33.632
CNS0095597Whole white alabastrum(diploid) 44.063
CNS0095598Silvery flower (diploied) 18.580
CNS0095599Silvery flower (diploied) 210.903
CNS0095600Silvery flower (diploied) 312.747
CNS0095601Golden flower (diploid) 17.761
CNS0095602Golden flower (diploid) 29.241
CNS0095603Golden flower (diploid) 310.275
CNS0095604Slightly white alabastrum(tetraploid) 16.294
CNS0095605Slightly white alabastrum(tetraploid) 24.057
CNS0095606Slightly white alabastrum(tetraploid) 312.245
CNS0095607Whole white alabastrum(tetraploid) 14.484
CNS0095608Whole white alabastrum(tetraploid) 23.421
CNS0095609Whole white alabastrum(tetraploid) 34.081
CNS0095610Silvery flower (tetraploid) 16.705
CNS0095611Silvery flower (tetraploid) 29.493
CNS0095612Silvery flower (tetraploid) 39.524
CNS0095613Golden flower (tetraploid) 12.127
CNS0095614Golden flower (tetraploid) 25.258
CNS0095615Golden flower (tetraploid) 32.887
CRA001975CRR073297Stem 110.719
CRR073298Stem 210.578
CRR073299Stem 39.373
CRR073300Leaf 122.093
CRR073301Leaf 221.606
CRR073302Leaf 316.522
CRR073303Juvenile bud 118.988
CRR073304Juvenile bud 220.508
CRR073305Juvenile bud 325.245
CRR073306Third green 136.099
CRR073307Third green 238.925
CRR073308Third green 332.673
CRR073309Second white 16.530
CRR073310Second white 24.528
CRR073311Second white 34.342
CRR073312Silver flowering 13.279
CRR073313Silver flowering 23.253
CRR073314Silver flowering 31.789
CRR073315Gold flowering 144.907
CRR073316Gold flowering 245.002
CRR073317Gold flowering 325.049
CRR073318Tawny withering 138.502
CRR073319Tawny withering 230.627
CRR073320Tawny withering 336.411