Gene detail

Detail information of GWHGAAZE010978

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP32578.1	1.79985E-63	hypothetical protein JCGZ_13128 [Jatropha curcas]
trEMBL	tr\|A0A067KC32\|A0A067KC32_JATCU	7E-64	Uncharacterized protein {ECO:0000313\|EMBL:KDP32578.1}

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	37549022	37553608	+
GWHAAZE00000003	mRNA	37549022	37553608	+
GWHAAZE00000003	exon	37549022	37549451	+
GWHAAZE00000003	exon	37549538	37551310	+
GWHAAZE00000003	exon	37552258	37552746	+
GWHAAZE00000003	exon	37553250	37553608	+
GWHAAZE00000003	CDS	37549022	37549451	+
GWHAAZE00000003	CDS	37549538	37551310	+
GWHAAZE00000003	CDS	37552258	37552746	+
GWHAAZE00000003	CDS	37553250	37553398	+
GWHAAZE00000003	three_prime_UTR	37553399	37553608	+

Transcript Sequence
>GWHTAAZE010990 ATCACCAAACCACTAAATAGTCCATCAAAGAGCAGCCAGGAACCGAAGGTTGTTGAAACTGTAACTACTGCACCACTGAAGGAAACCCGCACTGAGGAACTTGGTATTCCCATCAGCAGCTTGAATGGTTCGCCTATTAAATCTGAAATACCAATGGGTTCACCAAAAGAGATTATGCTGGTAAACCAAGAAGATGATTTGGATAAAATGTCTGCAACTGCAGCGAAGCCTCCTAGTAAAACTGTTAATGAAGCCTCAGAAGCAGAGTTACAGTTGCAAGATAGAGACGTATCAGTGCAAGGGCAAAGTGAGCGGTCTGGCCTTGAAATTCCCAAACCTGATGTTGAATCTGTTGAACTCAGGGAGATTCCTATTAAAACTGTACAATTTAGTGCAGATTCTGCCAAGGACATAGGTGTTGGTAGTCAAGACCAGCCCGAAGTTCTGATTGAAGATTTCATAGACCATAAAGAAGTGAAATCTGACCTGATGTCTTTACATGATCTTCCTCCTCAAGCTGAATCTGTTGAACACTTGGGGGCTTCTTTTGATACTGTCGAAACCAAATCAGATAGTGCCCCACGTGTTTGCGATACTGAATCGGTTGAGGTTTGTGACACCAAGGGGGAAGACAAGGAAGTTTTTCACATGCTTTCACCAGCCGATTTGCCCATAGTTGACCAGCCCGAAATTATGATTCAAGATTTCAAAGACCATAAAGCAGTGAAATCTAGCCTTTCTTTGAACTTATACTCCGATGCAGTAATTAAGACTGCAGAAGTCGGTATTGAAGATGCTGTTGAAAAAGAAGATATCCTTAAACAGGAAGGTAACAAGAACAACCTCGTAACTGAAAAGCCTGTTGAAAAAGAAGACGATTCTTCTGATTTGAAGGTCACACATGGTGAAGATCTTGGATTGAATGGCTTAGAAGCCCCTCCAGATTCATCCAATGCGGTTCCCAAGGTCAATTCTGTTGATGAAGGCAGGGAAAGAGATATTGAACTTTCAGCAAAGGTGGAATCTGAAGACAGTTTATGTGTTTCTAAAGCTGATCAAATTTGCAAATCAACTGGAGAATATGTTGGAGGTGAGCATGAAAACTCTGGGCTTGAAATTGAAAGTACAGGAGGAGAAACTGGGAAGGAAAATTTTGCAACCAACACAGAAACAAAGCTTGATTCTGCCTCCCAATTGTCAGAATTACCTTCTGTAGACTCTGTTCCAGATTCAAATTCTGTTGATGAAGGCAGGGAAAGAGATGTTGAACTTTCAGCAAAGGTGGAATCTGAAGACAGTGTATGTGTTTCTAAAGCTGATCAAATTAGCAAATTAACTGGAGAATATGTTGGAGGTAAGCATGAAACCTCTAGGCTTGAAATTGAAAGTACAGGAGGAGAAACTGGGAAGGAAAATTTTGCAACCAACACAGAAACAAAGCTTGATTCTGCCTCCCAATTGTCAGAATTACCTTCTGTAGACTCTGTTCCAGATTCAAATTCTGTTGATGAAGGCAGGGAAAGAGATGTTGAACTTTCAGCAAAGGTGGAATCTGAAGACAGTGTATGTGTTTCTAAAGCTGATCAAATAAGCAAATCAACTGGAGAATATGTTGGAGGTAAGCATGAAACCTCTAGGCTTGAAATTGAAAGTACAGGAGGAGAAACTGGGAAGGAAAATTTTGCAGCCAACATAGAAACAAAGCTCGATTCTGCCTCCCAATTGTCAGAATTACCTTCTGTAGACCATGTTCCAGATTCAAATAAGGTGGACTTCGATCCTCGGGAAGTCACTAAAGAAACTGAAAGTGGCATTGGTACTGTTGCTACAGGTTCTGAATCAAACCACACTACTGATGCTGAAGAAGTGGAGAAAATTTCCATGAAGCACGACTTGAAAGTGCCTACGACTTTGCCTATAGATTCCGGATCAGCCACTCACGTCACCGATGTTGAAGTACTAGAGAGAAACTCAGATAAGCCAATTTTTGAAGAGACAGGGCCTGTCCTTGTAGATTCTGGATTTGAAACTAAAACTTCTGGTACTGTTGACAAAAATGATTCTAGTGTCTGTTATGAACCGAAGCAAGATGAAGGCGATGACAAGCTCCTCAAGCAACAAGTTGGTGCTTCTGCGGTGCATGTATCAGTTGATTCAATAAGCCAAACTGACAGTTTGGAAGGCAACTGGGGATCGGTTTCAGTACTTTCCGTCCAGTCAGATGCACCAGCTAACATTGATGCTGAAACTTTACCCTCTAATGATTCCCAAGGACCCACAAAATCAGAGGACGACTTTCAAAAGCCAAAAGTGGGACTTGAGGGAAGCCATTCCGATAAACAAGAAGATGATTTGGAGCCCCCGTCTTACACGACACTGGTTGAATCAGAAGGATGTGGGGTTGAACCAAAAGCTGCGGATTCTAAAACCAATACGCTGCAGACCAGTGAGAAGCCAAATGCCGAAGCTTTACAATCTGGGTGGTTCCCGTCTCTTACTAATGTGGTCAATGAGTCGCAAGGGAGGAAGAAAAATGAGGAGGTCATTGCCAAGGTAACAAACTGGAGCGCTGGGATGGCGAAAGAACACAGTAATCTGAAAAATCTCCTGAGTGAAGCCAATGCTGAAACCAAACCTAAGCCGCCAAGCCCGAAACAAGCACCCTCCTCTGTCAGTCAGAAAGACAAAAATGTGTCAGACGTGAAAGCCGCTTCAATTGAGTGCTCTGAGGCTTCTGCGGATCAGGTTGTCAAGAAAGAGACAGCAAAGGAATGGAACTCGCCTGCCAGGTATCAAACTGAAATTAAGAAAGAGAAGAGGAAAGCGAAGAAATCAACCTGAGTTCCATTATTTTGTTGCTCTTCCGCTTCGGTCAATTAAATGCTGTAATTGTGTGCTATCCTAGTAAGAAGTATTTGACGTACATTTTGTGTATTATTTAGTGTGCACGCTACTAAGAGTGACTCTTGTAGATTTTAGGTATATTGAGTTGTTTGTAAAAGCTTTCTGGGTGTGACTTTATTGTTTGTATATTTTATGCTACTTAGCTTA

Network for GWHGAAZE010978

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	33.499
	SRR3591706	second leaf	11.003
	SRR3591707	mature leaf	15.587
	SRR3591708	Shoot apex	22.814
	SRR3591709	Stem	28.380
	SRR3591710	White floral bud	21.400
	SRR3591711	White flower	23.298
	SRR3591712	Green floral bud	16.687
	SRR3591713	Yellow flower	23.494
SRP173429	SRR8316895	Juvenile bud stage	12.861
	SRR8316896	Juvenile bud stage	17.767
	SRR8316897	Juvenile bud stage	4.427
	SRR8316894	Third green stage	6.610
	SRR8316900	Third green stage	16.665
	SRR8316901	Third green stage	15.209
	SRR8316898	Complete white stage	7.758
	SRR8316899	Complete white stage	26.979
	SRR8316903	Complete white stage	17.090
	SRR8316902	Silver flowering stage	6.644
	SRR8316904	Silver flowering stage	11.649
	SRR8316905	Silver flowering stage	5.712
	SRR8316906	Gold flowering stage	17.720
	SRR8316907	Gold flowering stage	15.911
	SRR8316908	Gold flowering stage	13.973
SRP132670	SRR6706286	Control	13.143
	SRR6706287	Light intensity 50%	12.805
	SRR6706288	Light intensity 20%	13.009
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	12.055
	CNS0095593	Slightly white alabastrum(diploid) 2	11.282
	CNS0095594	Slightly white alabastrum(diploid) 3	13.450
	CNS0095595	Whole white alabastrum(diploid) 2	10.442
	CNS0095596	Whole white alabastrum(diploid) 3	7.930
	CNS0095597	Whole white alabastrum(diploid) 4	9.310
	CNS0095598	Silvery flower (diploied) 1	19.478
	CNS0095599	Silvery flower (diploied) 2	16.414
	CNS0095600	Silvery flower (diploied) 3	23.764
	CNS0095601	Golden flower (diploid) 1	20.465
	CNS0095602	Golden flower (diploid) 2	30.498
	CNS0095603	Golden flower (diploid) 3	29.404
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.471
	CNS0095605	Slightly white alabastrum(tetraploid) 2	4.140
	CNS0095606	Slightly white alabastrum(tetraploid) 3	10.504
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.353
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.819
	CNS0095609	Whole white alabastrum(tetraploid) 3	6.472
	CNS0095610	Silvery flower (tetraploid) 1	8.252
	CNS0095611	Silvery flower (tetraploid) 2	8.485
	CNS0095612	Silvery flower (tetraploid) 3	6.441
	CNS0095613	Golden flower (tetraploid) 1	3.799
	CNS0095614	Golden flower (tetraploid) 2	7.256
	CNS0095615	Golden flower (tetraploid) 3	6.304
CRA001975	CRR073297	Stem 1	26.309
	CRR073298	Stem 2	23.407
	CRR073299	Stem 3	20.183
	CRR073300	Leaf 1	27.996
	CRR073301	Leaf 2	23.161
	CRR073302	Leaf 3	16.608
	CRR073303	Juvenile bud 1	23.746
	CRR073304	Juvenile bud 2	17.789
	CRR073305	Juvenile bud 3	29.088
	CRR073306	Third green 1	11.123
	CRR073307	Third green 2	9.993
	CRR073308	Third green 3	9.759
	CRR073309	Second white 1	9.022
	CRR073310	Second white 2	11.848
	CRR073311	Second white 3	9.198
	CRR073312	Silver flowering 1	12.536
	CRR073313	Silver flowering 2	15.969
	CRR073314	Silver flowering 3	13.775
	CRR073315	Gold flowering 1	11.663
	CRR073316	Gold flowering 2	22.557
	CRR073317	Gold flowering 3	16.608
	CRR073318	Tawny withering 1	32.146
	CRR073319	Tawny withering 2	28.520
	CRR073320	Tawny withering 3	32.618