Gene detail

Detail information of GWHGAAZE011093

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011046424.1	4.4702E-142	PREDICTED: BTB/POZ domain-containing protein At3g05675-like isoform X1 [Populus euphratica]
Swissprot	tr\|Q8RX01\|Y3567_ARATH	4E-102	BTB/POZ domain-containing protein At3g05675
trEMBL	tr\|B9H9K5\|B9H9K5_POPTR	3E-142	Uncharacterized protein {ECO:0000313\|EMBL:EEE92776.2}
TAIR10	AT3G05675.2	8E-78	BTB/POZ domain-containing protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	42209058	42213001	-
GWHAAZE00000003	mRNA	42209058	42213001	-
GWHAAZE00000003	exon	42209058	42209179	-
GWHAAZE00000003	exon	42210330	42210398	-
GWHAAZE00000003	exon	42210515	42210563	-
GWHAAZE00000003	exon	42211673	42211742	-
GWHAAZE00000003	exon	42211915	42212831	-
GWHAAZE00000003	exon	42212948	42213001	-
GWHAAZE00000003	CDS	42212948	42213001	-
GWHAAZE00000003	CDS	42211915	42212831	-
GWHAAZE00000003	CDS	42211673	42211742	-
GWHAAZE00000003	CDS	42210515	42210563	-
GWHAAZE00000003	CDS	42210330	42210398	-
GWHAAZE00000003	CDS	42209058	42209179	-

Transcript Sequence
>GWHTAAZE011105 ATGAAGACGAGTAGCGCAAGTAGATGTGGTGATCGATCAACCAGTGATGTCGTTATCCTTGATTCTCGCAATTGTGTTGAGGTTTACTGTGATGAATCCGATTTTGATTACTATGTCACTGTCCTACGCCTCTTCTACGTTAATATTACAAAATGCCCACTAAGTGAAATGTGGAATGGAGTCAAAAACGCCCTTTGCATTCTCCGGGTGGCGGTGGAACTTGGCTGCCCACAAATCATTACTGCTTGTGTGAGCTACATGGAATCAGTTCCTTGGGAAGAAGCCGAGGAGGAGGAGATACTAAAAGTTATACCTGGCATGGGACTTCAGGCCGAGCCGATTCTCAATCGTCTCCAGCCAGTTAATCCGACGACTATAATCAATATTTTCATCTCTGCTGTTCGATTTGCAACATCCTCGCCCCCTCTACCCATGACTGATTTGAAGACCTCGGCTCAAGAACAACTCGAGTACATGCTTACTGAGGACGATGATGCGCCATTACTAACCGCTGATAATGAGATAAAAATAGAAGTGCGGGAATGTGTGAAGAGACTATTAGCTAGGTTTAACAACTTGATCGATACTTTGTTATGTGGGTCAGAAGAATCAGATTTCAACGGAGGGGTAATTCGATCATTTCACTCCTACCTTGGGGACCTGTTGTGGGCATGTCAGATACTAGCAAAGCTAGAGACAATGAGGGAAGTTGTGAACGGTTGGATCGAAGAGTCAGAAAAGATGGTAAAAGTTGTTGAAAAGATGAGTGAGAAAGGAGAAATGGTCGACACAAGTTTAAAGGTTGTTGAGGTGACAGCGAAGGTTTTAGAGGCAATAGGGGATGGGACGGTGATTTTGTCAACGGTGGAACGGCTACACATGGTGAAGGTGTGGCTTCCATTTGTGAGGTGTTTGAAGCCGTTGATCGACTGTTCGACCACCAATGATGATGATGACGACGAAGAGGAGGGGTCTAAGGTTGCCAACAAAAGACTTGCGTTGTTAGGGCAATCGGGCCATGGATATGGCGTGCTCAAAATGATGAGTATGGCAGTATCGATCTCTTTGCAGCATCTTAACAAATCCAAGAGCAAGCCTTCTGAAGGGATGACTCCTCCTATTGCTGGGAGGATCCAGTTGGTGAAGTCAGTGAGTCAGGGCAAGCTAATAGTGAAGGTGTCTACTTTTCTAGTTGATGGGATTTGGTGCCTTCCTGCTGTTGCGTTTGGCTCTTCTCATTTCTATGTGGCACATCGATGTGAGGGAATTCCCATGGGCTAA

Network for GWHGAAZE011093

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0260

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	3.880
	SRR3591706	second leaf	3.480
	SRR3591707	mature leaf	1.691
	SRR3591708	Shoot apex	6.517
	SRR3591709	Stem	4.101
	SRR3591710	White floral bud	2.223
	SRR3591711	White flower	2.543
	SRR3591712	Green floral bud	7.751
	SRR3591713	Yellow flower	1.636
SRP173429	SRR8316895	Juvenile bud stage	5.109
	SRR8316896	Juvenile bud stage	8.199
	SRR8316897	Juvenile bud stage	2.265
	SRR8316894	Third green stage	2.909
	SRR8316900	Third green stage	9.350
	SRR8316901	Third green stage	10.515
	SRR8316898	Complete white stage	2.221
	SRR8316899	Complete white stage	11.879
	SRR8316903	Complete white stage	5.409
	SRR8316902	Silver flowering stage	1.157
	SRR8316904	Silver flowering stage	1.724
	SRR8316905	Silver flowering stage	1.253
	SRR8316906	Gold flowering stage	3.106
	SRR8316907	Gold flowering stage	2.989
	SRR8316908	Gold flowering stage	2.291
SRP132670	SRR6706286	Control	13.971
	SRR6706287	Light intensity 50%	13.565
	SRR6706288	Light intensity 20%	13.659
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	4.102
	CNS0095593	Slightly white alabastrum(diploid) 2	3.436
	CNS0095594	Slightly white alabastrum(diploid) 3	4.122
	CNS0095595	Whole white alabastrum(diploid) 2	4.341
	CNS0095596	Whole white alabastrum(diploid) 3	4.471
	CNS0095597	Whole white alabastrum(diploid) 4	5.026
	CNS0095598	Silvery flower (diploied) 1	4.120
	CNS0095599	Silvery flower (diploied) 2	3.233
	CNS0095600	Silvery flower (diploied) 3	3.499
	CNS0095601	Golden flower (diploid) 1	2.496
	CNS0095602	Golden flower (diploid) 2	3.416
	CNS0095603	Golden flower (diploid) 3	3.578
	CNS0095604	Slightly white alabastrum(tetraploid) 1	12.115
	CNS0095605	Slightly white alabastrum(tetraploid) 2	10.483
	CNS0095606	Slightly white alabastrum(tetraploid) 3	18.408
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.602
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.327
	CNS0095609	Whole white alabastrum(tetraploid) 3	21.789
	CNS0095610	Silvery flower (tetraploid) 1	5.935
	CNS0095611	Silvery flower (tetraploid) 2	6.070
	CNS0095612	Silvery flower (tetraploid) 3	8.632
	CNS0095613	Golden flower (tetraploid) 1	2.507
	CNS0095614	Golden flower (tetraploid) 2	6.576
	CNS0095615	Golden flower (tetraploid) 3	3.220
CRA001975	CRR073297	Stem 1	16.426
	CRR073298	Stem 2	17.455
	CRR073299	Stem 3	10.367
	CRR073300	Leaf 1	25.275
	CRR073301	Leaf 2	19.878
	CRR073302	Leaf 3	14.390
	CRR073303	Juvenile bud 1	11.603
	CRR073304	Juvenile bud 2	16.569
	CRR073305	Juvenile bud 3	13.873
	CRR073306	Third green 1	4.246
	CRR073307	Third green 2	4.486
	CRR073308	Third green 3	5.582
	CRR073309	Second white 1	2.169
	CRR073310	Second white 2	2.022
	CRR073311	Second white 3	2.097
	CRR073312	Silver flowering 1	1.577
	CRR073313	Silver flowering 2	2.157
	CRR073314	Silver flowering 3	1.838
	CRR073315	Gold flowering 1	4.630
	CRR073316	Gold flowering 2	5.307
	CRR073317	Gold flowering 3	5.082
	CRR073318	Tawny withering 1	5.039
	CRR073319	Tawny withering 2	4.491
	CRR073320	Tawny withering 3	5.259