Gene detail

Detail information of GWHGAAZE011304

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002518129.1	9.124E-132	monoxygenase, putative [Ricinus communis]
trEMBL	tr\|B9RWL0\|B9RWL0_RICCO	3E-132	Monoxygenase, putative {ECO:0000313\|EMBL:EEF44262.1}
TAIR10	AT3G24200.1	3E-94	FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	56498088	56501044	+
GWHAAZE00000003	mRNA	56498088	56501044	+
GWHAAZE00000003	exon	56498088	56498252	+
GWHAAZE00000003	exon	56500136	56500304	+
GWHAAZE00000003	exon	56500396	56500707	+
GWHAAZE00000003	exon	56500857	56501044	+
GWHAAZE00000003	CDS	56498088	56498252	+
GWHAAZE00000003	CDS	56500136	56500304	+
GWHAAZE00000003	CDS	56500396	56500707	+
GWHAAZE00000003	CDS	56500857	56501044	+

Transcript Sequence
>GWHTAAZE011316 ATGCAGAACAAAATCTACCCTTCCAGATTAGCTTCAATGACTTTGAGTCCTAGCTCTTCATCGGTGGCATTGAATGACACGTCATCAAGGACAACATTACAGACTCGTGGAAATTTAGCAAAGCTGGAACTGAGTGATGGAAATTATTTATATGCAAAGTTGGTGGTTGGAGCCGATGGGTCCAAGTCACACGTTCAGCGAACTAGCGGAATTAAAGCTACGGGATGGAAATACTCCCAAAATGCACTCATCTGTACTGTCCAACACAAAGAGGAAAACCCATGTGCATGGCAACGTTTTCTACCTACAGGCCCAATCGCACTTCTACCAATAGTAAACCATGCTTTGGATCACGGGTATGGCCCACATCCTCAATCGAAATTATTTGGTGGGGACATATTTTCTTGGATCAAGGGAGATTATGGGGTGTCTTCAGCAAAGGAGTCTTTTGAGGTTCCTCCAAAAGTAGTGAAGTTGGGGTCGGATAGAATGGCGTTTCCGTTGTCTTTAATGCATGCTAATAGTTATGCATCGAAGCGCGTTGTTTTGGTTGGTGATGCGGCACACACTGTTCATCCTTTGGCTGGTCAAGGAGTTAATATGGGTTTTGGAGATGCATTCTCTCTTTCGAGAGTTATTGCTGATGATAGGAAAATGGCCAATGTTGCGATGATGGCAATACTGGATGGTTTCCAAAAGGCATACTCTGTTGATTTTGGGCCACTCAATGTGTTGAGAGCTGCTGGTTTCCATGGCGCCCAGTACATTACGCCTCTTAAACAGAGCATTATCTCGTATGCTTCAGGTGAGCAGAAAATCCCACTTCTCTCCTAG

Network for GWHGAAZE011304

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01494.20	FAD_binding_3	48	214	6.20E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K06126	COQ6	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Ubiquinone and other terpenoid-quinone biosynthesis	map00130

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0071949	molecular_function	FAD binding
GO:0016709	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.277
	SRR3591706	second leaf	0.574
	SRR3591707	mature leaf	0.738
	SRR3591708	Shoot apex	0.656
	SRR3591709	Stem	0.347
	SRR3591710	White floral bud	0.209
	SRR3591711	White flower	0.170
	SRR3591712	Green floral bud	0.271
	SRR3591713	Yellow flower	0.149
SRP173429	SRR8316895	Juvenile bud stage	9.753
	SRR8316896	Juvenile bud stage	15.433
	SRR8316897	Juvenile bud stage	9.265
	SRR8316894	Third green stage	6.907
	SRR8316900	Third green stage	14.770
	SRR8316901	Third green stage	14.672
	SRR8316898	Complete white stage	3.423
	SRR8316899	Complete white stage	12.937
	SRR8316903	Complete white stage	8.777
	SRR8316902	Silver flowering stage	4.548
	SRR8316904	Silver flowering stage	5.219
	SRR8316905	Silver flowering stage	2.223
	SRR8316906	Gold flowering stage	5.157
	SRR8316907	Gold flowering stage	5.441
	SRR8316908	Gold flowering stage	5.961
SRP132670	SRR6706286	Control	9.001
	SRR6706287	Light intensity 50%	10.937
	SRR6706288	Light intensity 20%	11.101
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	20.091
	CNS0095593	Slightly white alabastrum(diploid) 2	15.145
	CNS0095594	Slightly white alabastrum(diploid) 3	13.859
	CNS0095595	Whole white alabastrum(diploid) 2	12.735
	CNS0095596	Whole white alabastrum(diploid) 3	10.737
	CNS0095597	Whole white alabastrum(diploid) 4	12.332
	CNS0095598	Silvery flower (diploied) 1	17.312
	CNS0095599	Silvery flower (diploied) 2	13.266
	CNS0095600	Silvery flower (diploied) 3	8.351
	CNS0095601	Golden flower (diploid) 1	15.832
	CNS0095602	Golden flower (diploid) 2	6.430
	CNS0095603	Golden flower (diploid) 3	7.708
	CNS0095604	Slightly white alabastrum(tetraploid) 1	19.586
	CNS0095605	Slightly white alabastrum(tetraploid) 2	12.847
	CNS0095606	Slightly white alabastrum(tetraploid) 3	14.402
	CNS0095607	Whole white alabastrum(tetraploid) 1	12.333
	CNS0095608	Whole white alabastrum(tetraploid) 2	8.608
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.382
	CNS0095610	Silvery flower (tetraploid) 1	10.666
	CNS0095611	Silvery flower (tetraploid) 2	10.342
	CNS0095612	Silvery flower (tetraploid) 3	9.198
	CNS0095613	Golden flower (tetraploid) 1	7.685
	CNS0095614	Golden flower (tetraploid) 2	7.286
	CNS0095615	Golden flower (tetraploid) 3	5.253
CRA001975	CRR073297	Stem 1	14.297
	CRR073298	Stem 2	12.916
	CRR073299	Stem 3	2.367
	CRR073300	Leaf 1	17.683
	CRR073301	Leaf 2	18.735
	CRR073302	Leaf 3	2.362
	CRR073303	Juvenile bud 1	4.274
	CRR073304	Juvenile bud 2	1.414
	CRR073305	Juvenile bud 3	3.940
	CRR073306	Third green 1	0.409
	CRR073307	Third green 2	0.215
	CRR073308	Third green 3	0.778
	CRR073309	Second white 1	0.517
	CRR073310	Second white 2	1.086
	CRR073311	Second white 3	0.996
	CRR073312	Silver flowering 1	0.250
	CRR073313	Silver flowering 2	0.313
	CRR073314	Silver flowering 3	0.281
	CRR073315	Gold flowering 1	4.095
	CRR073316	Gold flowering 2	4.459
	CRR073317	Gold flowering 3	0.829
	CRR073318	Tawny withering 1	4.172
	CRR073319	Tawny withering 2	10.366
	CRR073320	Tawny withering 3	5.771