Detail information of GWHGAAZE011315


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010264073.15.63903E-21PREDICTED: F-box protein PP2-B10-like [Nelumbo nucifera]
Swissprottr|O80494|P2B15_ARATH9E-15F-box protein PP2-B15
trEMBLtr|A0A022R2C8|A0A022R2C8_ERYGU6E-18Uncharacterized protein {ECO:0000313|EMBL:EYU32965.1}
TAIR10AT5G24560.11E-12phloem protein 2-B12

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene5685047456851945+
GWHAAZE00000003mRNA5685047456851945+
GWHAAZE00000003exon5685047456850674+
GWHAAZE00000003exon5685176356851945+
GWHAAZE00000003CDS5685047456850674+
GWHAAZE00000003CDS5685176356851945+
Transcript Sequence

Network for GWHGAAZE011315

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.744
SRR3591706second leaf1.289
SRR3591707mature leaf1.193
SRR3591708Shoot apex0.348
SRR3591709Stem2.874
SRR3591710White floral bud7.372
SRR3591711White flower6.952
SRR3591712Green floral bud4.265
SRR3591713Yellow flower6.790
SRP173429 SRR8316895Juvenile bud stage 3.380
SRR8316896Juvenile bud stage 5.355
SRR8316897Juvenile bud stage 0.283
SRR8316894Third green stage 3.393
SRR8316900Third green stage 8.095
SRR8316901Third green stage 5.875
SRR8316898Complete white stage 1.149
SRR8316899Complete white stage 7.975
SRR8316903Complete white stage 2.159
SRR8316902Silver flowering stage1.689
SRR8316904Silver flowering stage1.745
SRR8316905Silver flowering stage1.156
SRR8316906Gold flowering stage 3.571
SRR8316907Gold flowering stage 3.982
SRR8316908Gold flowering stage 1.350
SRP132670SRR6706286Control9.455
SRR6706287Light intensity 50%9.517
SRR6706288Light intensity 20%9.465
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.446
CNS0095593Slightly white alabastrum(diploid) 24.777
CNS0095594Slightly white alabastrum(diploid) 32.681
CNS0095595Whole white alabastrum(diploid) 24.326
CNS0095596Whole white alabastrum(diploid) 33.282
CNS0095597Whole white alabastrum(diploid) 45.385
CNS0095598Silvery flower (diploied) 13.598
CNS0095599Silvery flower (diploied) 22.177
CNS0095600Silvery flower (diploied) 32.166
CNS0095601Golden flower (diploid) 12.594
CNS0095602Golden flower (diploid) 23.824
CNS0095603Golden flower (diploid) 32.972
CNS0095604Slightly white alabastrum(tetraploid) 10.772
CNS0095605Slightly white alabastrum(tetraploid) 22.265
CNS0095606Slightly white alabastrum(tetraploid) 33.944
CNS0095607Whole white alabastrum(tetraploid) 10.294
CNS0095608Whole white alabastrum(tetraploid) 21.257
CNS0095609Whole white alabastrum(tetraploid) 32.370
CNS0095610Silvery flower (tetraploid) 13.293
CNS0095611Silvery flower (tetraploid) 21.359
CNS0095612Silvery flower (tetraploid) 32.439
CNS0095613Golden flower (tetraploid) 13.089
CNS0095614Golden flower (tetraploid) 21.683
CNS0095615Golden flower (tetraploid) 32.347
CRA001975CRR073297Stem 10.958
CRR073298Stem 22.376
CRR073299Stem 31.840
CRR073300Leaf 14.094
CRR073301Leaf 23.881
CRR073302Leaf 31.483
CRR073303Juvenile bud 10.786
CRR073304Juvenile bud 20.312
CRR073305Juvenile bud 32.553
CRR073306Third green 10.499
CRR073307Third green 20.629
CRR073308Third green 30.556
CRR073309Second white 10.118
CRR073310Second white 20.231
CRR073311Second white 30.155
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.121
CRR073314Silver flowering 30.977
CRR073315Gold flowering 10.715
CRR073316Gold flowering 20.702
CRR073317Gold flowering 30.980
CRR073318Tawny withering 12.216
CRR073319Tawny withering 20.835
CRR073320Tawny withering 30.699