Detail information of GWHGAAZE011331


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010645189.10PREDICTED: ubiquinone biosynthesis monooxygenase COQ6 isoform X1 [Vitis vinifera]
trEMBLtr|F6I1U5|F6I1U5_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB60912.1}
TAIR10AT3G24200.16E-170FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene5769852257709730+
GWHAAZE00000003mRNA5769852257709730+
GWHAAZE00000003exon5769852257698590+
GWHAAZE00000003exon5769993957700029+
GWHAAZE00000003exon5770080857700951+
GWHAAZE00000003exon5770174657701804+
GWHAAZE00000003exon5770253557702592+
GWHAAZE00000003exon5770455757704655+
GWHAAZE00000003exon5770504157705116+
GWHAAZE00000003exon5770520557705256+
GWHAAZE00000003exon5770675257706925+
GWHAAZE00000003exon5770883257709428+
GWHAAZE00000003exon5770951557709730+
GWHAAZE00000003CDS5769852257698590+
GWHAAZE00000003CDS5769993957700029+
GWHAAZE00000003CDS5770080857700951+
GWHAAZE00000003CDS5770174657701804+
GWHAAZE00000003CDS5770253557702592+
GWHAAZE00000003CDS5770455757704655+
GWHAAZE00000003CDS5770504157705116+
GWHAAZE00000003CDS5770520557705256+
GWHAAZE00000003CDS5770675257706925+
GWHAAZE00000003CDS5770883257709428+
GWHAAZE00000003CDS5770951557709730+
Transcript Sequence

Network for GWHGAAZE011331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01494.20FAD_binding_32653657.60E-05
PF01494.20FAD_binding_34134851.50E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06126COQ6 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0006744biological_processubiquinone biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0016709molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0003824molecular_functioncatalytic activity
GO:0004497molecular_functionmonooxygenase activity
GO:0071949molecular_functionFAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.517
SRR3591706second leaf0.300
SRR3591707mature leaf0.602
SRR3591708Shoot apex0.638
SRR3591709Stem0.336
SRR3591710White floral bud0.293
SRR3591711White flower0.244
SRR3591712Green floral bud0.425
SRR3591713Yellow flower0.286
SRP173429 SRR8316895Juvenile bud stage 5.329
SRR8316896Juvenile bud stage 6.423
SRR8316897Juvenile bud stage 7.338
SRR8316894Third green stage 3.321
SRR8316900Third green stage 4.804
SRR8316901Third green stage 6.689
SRR8316898Complete white stage 0.985
SRR8316899Complete white stage 5.180
SRR8316903Complete white stage 1.924
SRR8316902Silver flowering stage1.024
SRR8316904Silver flowering stage2.191
SRR8316905Silver flowering stage0.458
SRR8316906Gold flowering stage 1.779
SRR8316907Gold flowering stage 0.987
SRR8316908Gold flowering stage 2.307
SRP132670SRR6706286Control3.894
SRR6706287Light intensity 50%4.474
SRR6706288Light intensity 20%4.913
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.297
CNS0095593Slightly white alabastrum(diploid) 26.598
CNS0095594Slightly white alabastrum(diploid) 35.576
CNS0095595Whole white alabastrum(diploid) 25.936
CNS0095596Whole white alabastrum(diploid) 34.002
CNS0095597Whole white alabastrum(diploid) 44.990
CNS0095598Silvery flower (diploied) 14.172
CNS0095599Silvery flower (diploied) 23.329
CNS0095600Silvery flower (diploied) 31.342
CNS0095601Golden flower (diploid) 14.522
CNS0095602Golden flower (diploid) 21.702
CNS0095603Golden flower (diploid) 31.577
CNS0095604Slightly white alabastrum(tetraploid) 111.304
CNS0095605Slightly white alabastrum(tetraploid) 29.456
CNS0095606Slightly white alabastrum(tetraploid) 314.595
CNS0095607Whole white alabastrum(tetraploid) 16.121
CNS0095608Whole white alabastrum(tetraploid) 24.362
CNS0095609Whole white alabastrum(tetraploid) 36.612
CNS0095610Silvery flower (tetraploid) 15.736
CNS0095611Silvery flower (tetraploid) 24.179
CNS0095612Silvery flower (tetraploid) 33.654
CNS0095613Golden flower (tetraploid) 11.382
CNS0095614Golden flower (tetraploid) 24.062
CNS0095615Golden flower (tetraploid) 31.117
CRA001975CRR073297Stem 16.950
CRR073298Stem 25.780
CRR073299Stem 30.999
CRR073300Leaf 17.098
CRR073301Leaf 29.027
CRR073302Leaf 31.688
CRR073303Juvenile bud 10.936
CRR073304Juvenile bud 20.012
CRR073305Juvenile bud 31.164
CRR073306Third green 10.101
CRR073307Third green 20.000
CRR073308Third green 30.096
CRR073309Second white 10.211
CRR073310Second white 20.096
CRR073311Second white 30.084
CRR073312Silver flowering 10.032
CRR073313Silver flowering 20.026
CRR073314Silver flowering 30.007
CRR073315Gold flowering 11.569
CRR073316Gold flowering 22.110
CRR073317Gold flowering 30.886
CRR073318Tawny withering 12.449
CRR073319Tawny withering 22.815
CRR073320Tawny withering 31.456