Detail information of GWHGAAZE011337


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO43623.19.1574E-155hypothetical protein CISIN_1g0102001mg, partial [Citrus sinensis]
trEMBLtr|A0A067DL73|A0A067DL73_CITSI3E-155Uncharacterized protein {ECO:0000313|EMBL:KDO43623.1} (Fragment)
TAIR10AT3G24200.21E-110FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene5799119157995845-
GWHAAZE00000003mRNA5799119157995845-
GWHAAZE00000003exon5799119157992090-
GWHAAZE00000003exon5799332657993364-
GWHAAZE00000003exon5799399057994163-
GWHAAZE00000003exon5799579557995845-
GWHAAZE00000003CDS5799579557995845-
GWHAAZE00000003CDS5799399057994163-
GWHAAZE00000003CDS5799332657993364-
GWHAAZE00000003CDS5799119157992090-
Transcript Sequence

Network for GWHGAAZE011337

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06126COQ6 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.449
SRR3591706second leaf1.152
SRR3591707mature leaf1.699
SRR3591708Shoot apex1.106
SRR3591709Stem1.067
SRR3591710White floral bud0.413
SRR3591711White flower0.337
SRR3591712Green floral bud0.703
SRR3591713Yellow flower0.285
SRP173429 SRR8316895Juvenile bud stage 9.276
SRR8316896Juvenile bud stage 16.012
SRR8316897Juvenile bud stage 7.495
SRR8316894Third green stage 7.920
SRR8316900Third green stage 12.361
SRR8316901Third green stage 16.046
SRR8316898Complete white stage 3.480
SRR8316899Complete white stage 12.364
SRR8316903Complete white stage 9.164
SRR8316902Silver flowering stage3.992
SRR8316904Silver flowering stage5.902
SRR8316905Silver flowering stage2.664
SRR8316906Gold flowering stage 5.477
SRR8316907Gold flowering stage 7.835
SRR8316908Gold flowering stage 6.451
SRP132670SRR6706286Control10.339
SRR6706287Light intensity 50%11.986
SRR6706288Light intensity 20%13.754
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.984
CNS0095593Slightly white alabastrum(diploid) 210.164
CNS0095594Slightly white alabastrum(diploid) 310.263
CNS0095595Whole white alabastrum(diploid) 212.104
CNS0095596Whole white alabastrum(diploid) 38.263
CNS0095597Whole white alabastrum(diploid) 49.837
CNS0095598Silvery flower (diploied) 114.415
CNS0095599Silvery flower (diploied) 211.430
CNS0095600Silvery flower (diploied) 38.141
CNS0095601Golden flower (diploid) 19.916
CNS0095602Golden flower (diploid) 28.865
CNS0095603Golden flower (diploid) 36.858
CNS0095604Slightly white alabastrum(tetraploid) 114.536
CNS0095605Slightly white alabastrum(tetraploid) 210.580
CNS0095606Slightly white alabastrum(tetraploid) 315.575
CNS0095607Whole white alabastrum(tetraploid) 110.717
CNS0095608Whole white alabastrum(tetraploid) 29.336
CNS0095609Whole white alabastrum(tetraploid) 312.042
CNS0095610Silvery flower (tetraploid) 112.854
CNS0095611Silvery flower (tetraploid) 29.334
CNS0095612Silvery flower (tetraploid) 38.826
CNS0095613Golden flower (tetraploid) 16.615
CNS0095614Golden flower (tetraploid) 28.478
CNS0095615Golden flower (tetraploid) 35.590
CRA001975CRR073297Stem 117.764
CRR073298Stem 214.860
CRR073299Stem 33.455
CRR073300Leaf 118.287
CRR073301Leaf 218.723
CRR073302Leaf 33.514
CRR073303Juvenile bud 15.841
CRR073304Juvenile bud 21.576
CRR073305Juvenile bud 34.667
CRR073306Third green 10.870
CRR073307Third green 21.177
CRR073308Third green 30.839
CRR073309Second white 10.357
CRR073310Second white 20.576
CRR073311Second white 31.328
CRR073312Silver flowering 10.771
CRR073313Silver flowering 20.620
CRR073314Silver flowering 30.860
CRR073315Gold flowering 13.387
CRR073316Gold flowering 25.396
CRR073317Gold flowering 30.974
CRR073318Tawny withering 15.167
CRR073319Tawny withering 28.591
CRR073320Tawny withering 35.142