Detail information of GWHGAAZE011355


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010090634.17.33453E-08Serine/threonine-protein kinase BIK1 [Morus notabilis]
trEMBLtr|W9QW66|W9QW66_9ROSA0.00000003Serine/threonine-protein kinase BIK1 {ECO:0000313|EMBL:EXB40298.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene5854450958546483+
GWHAAZE00000003mRNA5854450958546483+
GWHAAZE00000003exon5854450958544571+
GWHAAZE00000003exon5854464958544759+
GWHAAZE00000003exon5854485258545010+
GWHAAZE00000003exon5854617458546301+
GWHAAZE00000003exon5854640458546483+
GWHAAZE00000003CDS5854450958544571+
GWHAAZE00000003CDS5854464958544759+
GWHAAZE00000003CDS5854485258544953+
GWHAAZE00000003three_prime_UTR5854495458545010+
GWHAAZE00000003three_prime_UTR5854617458546301+
GWHAAZE00000003three_prime_UTR5854640458546483+
Transcript Sequence

Network for GWHGAAZE011355

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0071


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.980
SRR3591706second leaf2.476
SRR3591707mature leaf2.665
SRR3591708Shoot apex3.086
SRR3591709Stem3.820
SRR3591710White floral bud6.120
SRR3591711White flower4.362
SRR3591712Green floral bud6.536
SRR3591713Yellow flower4.861
SRP173429 SRR8316895Juvenile bud stage 9.552
SRR8316896Juvenile bud stage 15.518
SRR8316897Juvenile bud stage 5.822
SRR8316894Third green stage 7.310
SRR8316900Third green stage 12.592
SRR8316901Third green stage 13.513
SRR8316898Complete white stage 4.280
SRR8316899Complete white stage 8.425
SRR8316903Complete white stage 20.579
SRR8316902Silver flowering stage12.020
SRR8316904Silver flowering stage28.810
SRR8316905Silver flowering stage10.032
SRR8316906Gold flowering stage 31.497
SRR8316907Gold flowering stage 25.227
SRR8316908Gold flowering stage 16.631
SRP132670SRR6706286Control28.248
SRR6706287Light intensity 50%27.601
SRR6706288Light intensity 20%29.553
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.060
CNS0095593Slightly white alabastrum(diploid) 22.411
CNS0095594Slightly white alabastrum(diploid) 35.716
CNS0095595Whole white alabastrum(diploid) 23.606
CNS0095596Whole white alabastrum(diploid) 31.612
CNS0095597Whole white alabastrum(diploid) 43.111
CNS0095598Silvery flower (diploied) 14.348
CNS0095599Silvery flower (diploied) 22.910
CNS0095600Silvery flower (diploied) 324.379
CNS0095601Golden flower (diploid) 11.608
CNS0095602Golden flower (diploid) 220.833
CNS0095603Golden flower (diploid) 317.956
CNS0095604Slightly white alabastrum(tetraploid) 18.763
CNS0095605Slightly white alabastrum(tetraploid) 24.174
CNS0095606Slightly white alabastrum(tetraploid) 329.329
CNS0095607Whole white alabastrum(tetraploid) 11.583
CNS0095608Whole white alabastrum(tetraploid) 23.488
CNS0095609Whole white alabastrum(tetraploid) 313.890
CNS0095610Silvery flower (tetraploid) 111.582
CNS0095611Silvery flower (tetraploid) 212.960
CNS0095612Silvery flower (tetraploid) 314.528
CNS0095613Golden flower (tetraploid) 15.013
CNS0095614Golden flower (tetraploid) 28.138
CNS0095615Golden flower (tetraploid) 315.687
CRA001975CRR073297Stem 119.769
CRR073298Stem 214.000
CRR073299Stem 33.468
CRR073300Leaf 110.078
CRR073301Leaf 29.160
CRR073302Leaf 30.743
CRR073303Juvenile bud 11.580
CRR073304Juvenile bud 20.030
CRR073305Juvenile bud 31.556
CRR073306Third green 10.953
CRR073307Third green 20.360
CRR073308Third green 31.153
CRR073309Second white 10.810
CRR073310Second white 22.220
CRR073311Second white 30.865
CRR073312Silver flowering 10.875
CRR073313Silver flowering 20.394
CRR073314Silver flowering 30.245
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.241
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.925
CRR073319Tawny withering 22.512
CRR073320Tawny withering 30.074