Detail information of GWHGAAZE011382


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006367017.11.75133E-18PREDICTED: TMV resistance protein N-like, partial [Solanum tuberosum]
trEMBLtr|M5Y961|M5Y961_PRUPE1E-16Uncharacterized protein {ECO:0000313|EMBL:EMJ28580.1}
TAIR10AT1G72840.20.0000001Disease resistance protein (TIR-NBS-LRR class)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene5922774159228097-
GWHAAZE00000003mRNA5922774159228097-
GWHAAZE00000003exon5922774159228097-
GWHAAZE00000003CDS5922774159228097-
Transcript Sequence

Network for GWHGAAZE011382

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0081


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.012
SRR3591706second leaf1.706
SRR3591707mature leaf1.637
SRR3591708Shoot apex1.669
SRR3591709Stem3.324
SRR3591710White floral bud0.710
SRR3591711White flower1.207
SRR3591712Green floral bud0.635
SRR3591713Yellow flower1.376
SRP173429 SRR8316895Juvenile bud stage 8.627
SRR8316896Juvenile bud stage 5.707
SRR8316897Juvenile bud stage 9.103
SRR8316894Third green stage 1.625
SRR8316900Third green stage 2.618
SRR8316901Third green stage 6.845
SRR8316898Complete white stage 0.701
SRR8316899Complete white stage 7.401
SRR8316903Complete white stage 0.484
SRR8316902Silver flowering stage1.648
SRR8316904Silver flowering stage1.189
SRR8316905Silver flowering stage0.902
SRR8316906Gold flowering stage 3.444
SRR8316907Gold flowering stage 2.686
SRR8316908Gold flowering stage 4.420
SRP132670SRR6706286Control0.025
SRR6706287Light intensity 50%0.153
SRR6706288Light intensity 20%0.153
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.889
CNS0095593Slightly white alabastrum(diploid) 25.454
CNS0095594Slightly white alabastrum(diploid) 34.909
CNS0095595Whole white alabastrum(diploid) 22.264
CNS0095596Whole white alabastrum(diploid) 31.424
CNS0095597Whole white alabastrum(diploid) 43.435
CNS0095598Silvery flower (diploied) 110.377
CNS0095599Silvery flower (diploied) 26.702
CNS0095600Silvery flower (diploied) 36.772
CNS0095601Golden flower (diploid) 18.712
CNS0095602Golden flower (diploid) 28.332
CNS0095603Golden flower (diploid) 310.721
CNS0095604Slightly white alabastrum(tetraploid) 10.832
CNS0095605Slightly white alabastrum(tetraploid) 20.556
CNS0095606Slightly white alabastrum(tetraploid) 32.775
CNS0095607Whole white alabastrum(tetraploid) 10.420
CNS0095608Whole white alabastrum(tetraploid) 20.363
CNS0095609Whole white alabastrum(tetraploid) 32.419
CNS0095610Silvery flower (tetraploid) 12.245
CNS0095611Silvery flower (tetraploid) 22.438
CNS0095612Silvery flower (tetraploid) 35.459
CNS0095613Golden flower (tetraploid) 14.654
CNS0095614Golden flower (tetraploid) 24.644
CNS0095615Golden flower (tetraploid) 36.762
CRA001975CRR073297Stem 10.107
CRR073298Stem 20.344
CRR073299Stem 30.606
CRR073300Leaf 11.018
CRR073301Leaf 22.771
CRR073302Leaf 30.085
CRR073303Juvenile bud 10.423
CRR073304Juvenile bud 20.252
CRR073305Juvenile bud 30.455
CRR073306Third green 10.409
CRR073307Third green 20.159
CRR073308Third green 30.021
CRR073309Second white 10.000
CRR073310Second white 20.445
CRR073311Second white 30.660
CRR073312Silver flowering 11.906
CRR073313Silver flowering 20.760
CRR073314Silver flowering 30.065
CRR073315Gold flowering 10.488
CRR073316Gold flowering 22.331
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.467
CRR073319Tawny withering 21.925
CRR073320Tawny withering 31.257