Detail information of GWHGAAZE011426


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009598854.18.6179E-42PREDICTED: uncharacterized protein LOC104094596 [Nicotiana tomentosiformis]
trEMBLtr|K4C2N0|K4C2N0_SOLLC2E-41Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc05g055540.1.1}
TAIR10AT2G39210.16E-32Major facilitator superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene6044836760449793-
GWHAAZE00000003mRNA6044836760449793-
GWHAAZE00000003exon6044836760448683-
GWHAAZE00000003exon6044945260449665-
GWHAAZE00000003exon6044974060449793-
GWHAAZE00000003CDS6044974060449793-
GWHAAZE00000003CDS6044945260449665-
GWHAAZE00000003CDS6044836760448683-
Transcript Sequence

Network for GWHGAAZE011426

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0213


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.996
SRR3591711White flower1.112
SRR3591712Green floral bud1.452
SRR3591713Yellow flower0.651
SRP173429 SRR8316895Juvenile bud stage 0.899
SRR8316896Juvenile bud stage 0.941
SRR8316897Juvenile bud stage 0.163
SRR8316894Third green stage 0.519
SRR8316900Third green stage 0.211
SRR8316901Third green stage 0.258
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.813
SRR8316903Complete white stage 0.395
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.062
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.717
SRP132670SRR6706286Control0.106
SRR6706287Light intensity 50%0.198
SRR6706288Light intensity 20%0.078
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.875
CNS0095593Slightly white alabastrum(diploid) 24.299
CNS0095594Slightly white alabastrum(diploid) 33.741
CNS0095595Whole white alabastrum(diploid) 21.393
CNS0095596Whole white alabastrum(diploid) 33.023
CNS0095597Whole white alabastrum(diploid) 43.984
CNS0095598Silvery flower (diploied) 11.562
CNS0095599Silvery flower (diploied) 21.047
CNS0095600Silvery flower (diploied) 30.316
CNS0095601Golden flower (diploid) 10.457
CNS0095602Golden flower (diploid) 20.082
CNS0095603Golden flower (diploid) 30.285
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.411
CRR073298Stem 20.335
CRR073299Stem 30.170
CRR073300Leaf 10.054
CRR073301Leaf 20.069
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.863
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.455
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.075
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000